RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PRPF40BQ6NWY9 871 aaKnown RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 SLC4A10Q6U841 1118 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 SAMD7Q7Z3H4 446 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 DZIP1LQ8IYY4 767 aaKnown RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 RTKN2Q8IZC4 609 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 SPRYD3Q8NCJ5 442 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 TTLL11Q8NHH1 800 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 GRAPLQ8TC17 118 aaPredicted RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 ARAP2Q8WZ64 1704 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 FRAT1Q92837 279 aaPredicted RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 PSMD1Q99460 953 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 IL21Q9HBE4 155 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 PODXL2Q9NZ53 605 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 DDX19BQ9UMR2 479 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 ATP6V0A2Q9Y487 856 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 SCN4AP35499 1836 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 WDR90Q96KV7 1748 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 ZNF609O15014 1411 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 ADAMTSL1Q8N6G6 1762 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 FAM177BA6PVY3 158 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 HCLS1P14317 486 aaPredicted RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 YBX3P16989 372 aaKnown RBP eCLIP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 RPS8P62241 208 aaKnown RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 FOXO4P98177 505 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 IFIT5Q13325 482 aaKnown RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 MVPQ14764 893 aaKnown RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 GPR162Q16538 588 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 CCDC93Q567U6 631 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 PPP1R18Q6NYC8 613 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 SP8Q8IXZ3 490 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 ZNF516Q92618 1163 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 KAZALD1Q96I82 304 aa4.41□□□□□ -1.7
TRIM59-202ENST00000468542 RTFDC1Q9BY42 306 aaPredicted RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 TMX4Q9H1E5 349 aaPredicted RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 BSDC1Q9NW68 430 aaPredicted RBP4.41□□□□□ -1.7
TRIM59-202ENST00000468542 SCN9AQ15858 1988 aa4.4□□□□□ -1.7
TRIM59-202ENST00000468542 ECM29Q5VYK3 1845 aa4.4□□□□□ -1.7
TRIM59-202ENST00000468542 ANKRD18BA2A2Z9 1011 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 PPEF1O14829 653 aaPredicted RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ZBTB7BO15156 539 aaPredicted RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 GFRA3O60609 400 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 CIAO1O76071 339 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 GNAI2P04899 355 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 RLBP1P12271 317 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ITGA6P23229 1130 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 FKBP4Q02790 459 aaKnown RBP eCLIP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 SUZ12Q15022 739 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 CCDC57Q2TAC2 916 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 LMBR1LQ6UX01 489 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 C15orf52Q6ZUT6 534 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ANKRD18AQ8IVF6 992 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ITPRIPQ8IWB1 547 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 SYNE4Q8N205 404 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ANKRD44Q8N8A2 993 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 SUPT20HQ8NEM7 779 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 ZNF622Q969S3 477 aaKnown RBP eCLIP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 SUCLG2Q96I99 432 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 YTHDC1Q96MU7 727 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 MEIS3Q99687 375 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 MTRQ99707 1265 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 TMUB1Q9BVT8 246 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 TAOK3Q9H2K8 898 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 BICC1Q9H694 974 aaKnown RBP4.4□□□□□ -1.71
TRIM59-202ENST00000468542 GREM2Q9H772 168 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 BCS1LQ9Y276 419 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 MYH13Q9UKX3 1938 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 LAMB1P07942 1786 aa4.4□□□□□ -1.71
TRIM59-202ENST00000468542 CEP350Q5VT06 3117 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 NFKBIEO00221 500 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 NRG2O14511 850 aaPredicted RBP4.39□□□□□ -1.71
TRIM59-202ENST00000468542 C21orf2O43822 256 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 LMNB1P20700 586 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 APLP1P51693 650 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 FAM161AQ3B820 660 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 RTL5Q5HYW3 569 aaPredicted RBP4.39□□□□□ -1.71
TRIM59-202ENST00000468542 EPHA10Q5JZY3 1008 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 RPAP2Q8IXW5 612 aaPredicted RBP4.39□□□□□ -1.71
TRIM59-202ENST00000468542 CCDC24Q8N4L8 307 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 CELF1Q92879 486 aaKnown RBP4.39□□□□□ -1.71
TRIM59-202ENST00000468542 CLUAP1Q96AJ1 413 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 MPHOSPH8Q99549 860 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 PRKD2Q9BZL6 878 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 CDHR5Q9HBB8 845 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 ZBTB40Q9NUA8 1239 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.39□□□□□ -1.71
TRIM59-202ENST00000468542 PNMA3Q9UL41 463 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 LEMD3Q9Y2U8 911 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 XDHP47989 1333 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 MROH5Q6ZUA9 1318 aa4.39□□□□□ -1.71
TRIM59-202ENST00000468542 EYA2O00167 538 aa4.38□□□□□ -1.71
TRIM59-202ENST00000468542 ATP2B4P23634 1241 aa4.38□□□□□ -1.71
TRIM59-202ENST00000468542 IL15P40933 162 aaPredicted RBP4.38□□□□□ -1.71
TRIM59-202ENST00000468542 RFX5P48382 616 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms