RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 CTSWP56202 376 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 GNAI1P63096 354 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 C3orf67Q6ZVT6 689 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 SLC17A8Q8NDX2 589 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 IFT57Q9NWB7 429 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 ANGEL1Q9UNK9 670 aaKnown RBP7.34□□□□□ -1.24
CXXC4-202ENST00000466963 U3KPZ7 1027 aaPredicted RBP7.34□□□□□ -1.24
CXXC4-202ENST00000466963 CXCL11O14625 94 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 CC2D1BQ5T0F9 858 aaKnown RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 CELF1Q92879 486 aaKnown RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 SPINK5Q9NQ38 1064 aaPredicted RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 FCGRTP55899 365 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 HDGFL1Q5TGJ6 251 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 PARK7Q99497 189 aaKnown RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 DEFB129Q9H1M3 183 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 SRRDQ9UH36 339 aa7.33□□□□□ -1.24
CXXC4-202ENST00000466963 COLQQ9Y215 455 aaPredicted RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 COL2A1P02458 1487 aaPredicted RBP7.33□□□□□ -1.24
CXXC4-202ENST00000466963 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 TMED8Q6PL24 325 aaPredicted RBP7.32□□□□□ -1.24
CXXC4-202ENST00000466963 FASTKD5Q7L8L6 764 aaKnown RBP7.32□□□□□ -1.24
CXXC4-202ENST00000466963 TMOD2Q9NZR1 351 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 SPDYE2BA6NHP3 402 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 SPDYE6P0CI01 402 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 CRHR2Q13324 411 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
CXXC4-202ENST00000466963 KCNH4Q9UQ05 1017 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
CXXC4-202ENST00000466963 PABPC4Q13310 644 aaKnown RBP eCLIP7.32□□□□□ -1.24
CXXC4-202ENST00000466963 TTLL5Q6EMB2 1281 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 RIC3Q7Z5B4 369 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 CRISPLD2Q9H0B8 497 aa7.32□□□□□ -1.24
CXXC4-202ENST00000466963 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 POTEFA5A3E0 1075 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 CD99L2Q8TCZ2 262 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 RUNDC1Q96C34 613 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 MS4A4AQ96JQ5 239 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 IL16Q14005 1332 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 MYPNQ86TC9 1320 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 OTOFQ9HC10 1997 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 RIMBP2O15034 1052 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 TMPOP42166 694 aaKnown RBP7.31□□□□□ -1.24
CXXC4-202ENST00000466963 UBE4AQ14139 1066 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 RBM26Q5T8P6 1007 aaKnown RBP7.31□□□□□ -1.24
CXXC4-202ENST00000466963 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
CXXC4-202ENST00000466963 H0YGN5 161 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 USP2O75604 605 aaPredicted RBP7.3□□□□□ -1.24
CXXC4-202ENST00000466963 CSF1RP07333 972 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 GRK4P32298 578 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 DOK7Q18PE1 504 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 C17orf99Q6UX52 265 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 ZNF341Q9BYN7 854 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 FBXO3Q9UK99 471 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 FARP2O94887 1054 aaPredicted RBP7.3□□□□□ -1.24
CXXC4-202ENST00000466963 RIPK4P57078 832 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 KSR2Q6VAB6 950 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.3□□□□□ -1.24
CXXC4-202ENST00000466963 HDAC5Q9UQL6 1122 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 IGF2BP3O00425 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
CXXC4-202ENST00000466963 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 ZNF112Q9UJU3 913 aa7.3□□□□□ -1.24
CXXC4-202ENST00000466963 CEP350Q5VT06 3117 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 CCL15-CCL14A0A0B4J2E2 113 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 H7C1W4 665 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 SGPL1O95470 568 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 ZNF853P0CG23 659 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 GCLCP48506 637 aaPredicted RBP7.29□□□□□ -1.24
CXXC4-202ENST00000466963 CCL15Q16663 113 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 CD209Q9NNX6 404 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 SASH1O94885 1247 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 KCNJ4P48050 445 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 MPHOSPH8Q99549 860 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 PTCH2Q9Y6C5 1203 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 PDS5AQ29RF7 1337 aaKnown RBP7.29□□□□□ -1.24
CXXC4-202ENST00000466963 MGAMO43451 1857 aa7.29□□□□□ -1.24
CXXC4-202ENST00000466963 ANKRD18BA2A2Z9 1011 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 EN2P19622 333 aaPredicted RBP7.28□□□□□ -1.24
CXXC4-202ENST00000466963 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 TTLL11Q8NHH1 800 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 RAET1EQ8TD07 263 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 OPTNQ96CV9 577 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 NBPF9Q3BBW0 867 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 GDF15Q99988 308 aa7.28□□□□□ -1.24
CXXC4-202ENST00000466963 SEMA3EO15041 775 aa7.27□□□□□ -1.24
CXXC4-202ENST00000466963 EVI5O60447 810 aa7.27□□□□□ -1.24
CXXC4-202ENST00000466963 MSCO60682 206 aa7.27□□□□□ -1.24
CXXC4-202ENST00000466963 EIF2S2P20042 333 aaKnown RBP7.27□□□□□ -1.24
CXXC4-202ENST00000466963 DPF3Q92784 378 aa7.27□□□□□ -1.24
CXXC4-202ENST00000466963 STK31Q9BXU1 1019 aa7.27□□□□□ -1.24
CXXC4-202ENST00000466963 MROH5Q6ZUA9 1318 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 EGFRP00533 1210 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 PIP4K2AP48426 406 aaPredicted RBP7.27□□□□□ -1.25
CXXC4-202ENST00000466963 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 TDRD7Q8NHU6 1098 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms