RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 EPHX2P34913 555 aa12.37□□□□□ -0.43
PTPN20-211ENST00000466912 FKBP1AP62942 108 aaKnown RBP12.37□□□□□ -0.43
PTPN20-211ENST00000466912 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-211ENST00000466912 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
PTPN20-211ENST00000466912 CERS5Q8N5B7 392 aa12.37□□□□□ -0.43
PTPN20-211ENST00000466912 EAF2Q96CJ1 260 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-211ENST00000466912 CNOT7Q9UIV1 285 aaKnown RBP12.37□□□□□ -0.43
PTPN20-211ENST00000466912 IQSEC3Q9UPP2 1182 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-211ENST00000466912 JAG2Q9Y219 1238 aa12.37□□□□□ -0.43
PTPN20-211ENST00000466912 SCN9AQ15858 1988 aa12.37□□□□□ -0.43
PTPN20-211ENST00000466912 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-211ENST00000466912 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-211ENST00000466912 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-211ENST00000466912 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
PTPN20-211ENST00000466912 EGFRP00533 1210 aa12.35□□□□□ -0.43
PTPN20-211ENST00000466912 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-211ENST00000466912 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
PTPN20-211ENST00000466912 DBNDD2Q9BQY9 259 aa12.35□□□□□ -0.43
PTPN20-211ENST00000466912 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-211ENST00000466912 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
PTPN20-211ENST00000466912 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
PTPN20-211ENST00000466912 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
PTPN20-211ENST00000466912 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
PTPN20-211ENST00000466912 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-211ENST00000466912 H7C1D1 291 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 APBB1O00213 710 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 SEMA3EO15041 775 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 TOMM70O94826 608 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-211ENST00000466912 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 GRIK5Q16478 980 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-211ENST00000466912 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
PTPN20-211ENST00000466912 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-211ENST00000466912 GNL3LQ9NVN8 582 aaKnown RBP12.34□□□□□ -0.43
PTPN20-211ENST00000466912 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-211ENST00000466912 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-211ENST00000466912 AACSQ86V21 672 aa12.33□□□□□ -0.44
PTPN20-211ENST00000466912 KIAA0825Q8IV33 1275 aa12.33□□□□□ -0.44
PTPN20-211ENST00000466912 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
PTPN20-211ENST00000466912 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
PTPN20-211ENST00000466912 ZNF512BQ96KM6 892 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-211ENST00000466912 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
PTPN20-211ENST00000466912 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-211ENST00000466912 IGHDP01880 384 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 MMP14P50281 582 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 SCARF1Q14162 830 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-211ENST00000466912 EAPPQ56P03 285 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-211ENST00000466912 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 C16orf71Q8IYS4 520 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-211ENST00000466912 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 HMG20BQ9P0W2 317 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 PGAP2Q9UHJ9 254 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
PTPN20-211ENST00000466912 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
PTPN20-211ENST00000466912 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-211ENST00000466912 MCAMP43121 646 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 CCDC158Q5M9N0 1113 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 PI16Q6UXB8 463 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-211ENST00000466912 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
PTPN20-211ENST00000466912 SCN4AP35499 1836 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 TTC39AQ5SRH9 613 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
PTPN20-211ENST00000466912 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 OGFOD1Q8N543 542 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 SPATA5Q8NB90 893 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
PTPN20-211ENST00000466912 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 HDAC9Q9UKV0 1011 aa12.3□□□□□ -0.44
PTPN20-211ENST00000466912 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
PTPN20-211ENST00000466912 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-211ENST00000466912 WNT10BO00744 389 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
PTPN20-211ENST00000466912 PRDX5P30044 214 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 C1QTNF8P60827 252 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 FSTL1Q12841 308 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-211ENST00000466912 MRIQ9BWK5 157 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-211ENST00000466912 PCDHAC2Q9Y5I4 1007 aa12.29□□□□□ -0.44
PTPN20-211ENST00000466912 PSME4Q14997 1843 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms