RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 SELENOOQ9BVL4 669 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 ZWINTO95229 277 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 MXRA7P84157 204 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 RTN1Q16799 776 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 GSTA5Q7RTV2 222 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 TMTC2Q8N394 836 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 SPAG5Q96R06 1193 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 FAM107BQ9H098 131 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 SPDYE3A6NKU9 549 aa9.9□□□□□ -0.83
HPS4-209ENST00000466781 SH3BP5O60239 455 aa9.9□□□□□ -0.83
HPS4-209ENST00000466781 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.83
HPS4-209ENST00000466781 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.83
HPS4-209ENST00000466781 KDM5AP29375 1690 aaKnown RBP9.9□□□□□ -0.83
HPS4-209ENST00000466781 PPFIA3O75145 1194 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
HPS4-209ENST00000466781 TNNI2P48788 182 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 ISM2Q6H9L7 571 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 CCDC63Q8NA47 563 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 SNX16P57768 344 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 CNBD1Q8NA66 436 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 MAGEB6P1A0A0J9YX57 407 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 TMEM110-MUSTN1A8MSY1 372 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 ZBTB43O43298 467 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
HPS4-209ENST00000466781 RFX1P22670 979 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 RRP36Q96EU6 259 aaKnown RBP9.89□□□□□ -0.83
HPS4-209ENST00000466781 CTAGE1Q96RT6 745 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 ANKRD2Q9GZV1 360 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 N4BP3O15049 544 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
HPS4-209ENST00000466781 ERVK-7P63135 1459 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 RTL9Q8NET4 1388 aa9.89□□□□□ -0.83
HPS4-209ENST00000466781 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 NSRP1Q9H0G5 558 aaKnown RBP9.88□□□□□ -0.83
HPS4-209ENST00000466781 CEP83Q9Y592 693 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 AKR1B10O60218 316 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 CYLC1P35663 651 aaPredicted RBP9.88□□□□□ -0.83
HPS4-209ENST00000466781 CCDC50Q8IVM0 306 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 IRS4O14654 1257 aaPredicted RBP9.88□□□□□ -0.83
HPS4-209ENST00000466781 PLCG2P16885 1265 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 AFMP43652 599 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 SYKP43405 635 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 SNW1Q13573 536 aaKnown RBP9.88□□□□□ -0.83
HPS4-209ENST00000466781 CCDC14Q49A88 953 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 ALG1Q9BT22 464 aa9.88□□□□□ -0.83
HPS4-209ENST00000466781 ZSCAN16Q9H4T2 348 aaPredicted RBP9.88□□□□□ -0.83
HPS4-209ENST00000466781 H0YIN7 160 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ATP2A1O14983 1001 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
HPS4-209ENST00000466781 GAS8O95995 478 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
HPS4-209ENST00000466781 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
HPS4-209ENST00000466781 ATP2B3Q16720 1220 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 MAP7D1Q3KQU3 841 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ZSCAN30Q86W11 494 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 PODXL2Q9NZ53 605 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 PSMC4P43686 418 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ASIC1P78348 528 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 C8orf58Q8NAV2 365 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 KIAA1524Q8TCG1 905 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ZC3H12CQ9C0D7 883 aaKnown RBP9.87□□□□□ -0.83
HPS4-209ENST00000466781 TFIP11Q9UBB9 837 aaKnown RBP9.87□□□□□ -0.83
HPS4-209ENST00000466781 FBF1Q8TES7 1133 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ZBTB21Q9ULJ3 1066 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 TIGD1Q96MW7 591 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 CCDC77Q9BR77 488 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 JAG2Q9Y219 1238 aa9.87□□□□□ -0.83
HPS4-209ENST00000466781 ALDH1L1O75891 902 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.86□□□□□ -0.83
HPS4-209ENST00000466781 ESPNB1AK53 854 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 STMN4Q9H169 189 aaPredicted RBP9.86□□□□□ -0.83
HPS4-209ENST00000466781 NOD1Q9Y239 953 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 KRT24Q2M2I5 525 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 ZNF335Q9H4Z2 1342 aaPredicted RBP9.86□□□□□ -0.83
HPS4-209ENST00000466781 MAK16Q9BXY0 300 aaKnown RBP9.86□□□□□ -0.83
HPS4-209ENST00000466781 TXNDC16Q9P2K2 825 aa9.86□□□□□ -0.83
HPS4-209ENST00000466781 GNAT2P19087 354 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 CFAP58Q5T655 872 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 TMOD4Q9NZQ9 345 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 USP25Q9UHP3 1055 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 PSMA7O14818 248 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 SSFA2P28290 1259 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
HPS4-209ENST00000466781 FLAD1Q8NFF5 587 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 C16orf45Q96MC5 204 aaPredicted RBP9.85□□□□□ -0.83
HPS4-209ENST00000466781 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 KRT2P35908 639 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 TERF1P54274 439 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 FAM169AQ9Y6X4 670 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 BACH1O14867 736 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms