RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
UBA3-209ENST00000466763 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
UBA3-209ENST00000466763 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
UBA3-209ENST00000466763 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
UBA3-209ENST00000466763 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
UBA3-209ENST00000466763 H7C1D1 291 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 TNNI3KQ59H18 835 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
UBA3-209ENST00000466763 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
UBA3-209ENST00000466763 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 CLEC11AQ9Y240 323 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 FPGT-TNNI3KV9GXZ4 949 aa17.1■□□□□ 0.33
UBA3-209ENST00000466763 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
UBA3-209ENST00000466763 PHKA1P46020 1223 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 AAMPQ13685 434 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 AGBL3Q8NEM8 1001 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
UBA3-209ENST00000466763 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 SCN4AP35499 1836 aa17.09■□□□□ 0.33
UBA3-209ENST00000466763 PSME4Q14997 1843 aa17.08■□□□□ 0.33
UBA3-209ENST00000466763 ZNF609O15014 1411 aa17.08■□□□□ 0.32
UBA3-209ENST00000466763 AACSQ86V21 672 aa17.08■□□□□ 0.32
UBA3-209ENST00000466763 DPF2Q92785 391 aa17.08■□□□□ 0.32
UBA3-209ENST00000466763 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
UBA3-209ENST00000466763 MYO3BQ8WXR4 1341 aa17.07■□□□□ 0.32
UBA3-209ENST00000466763 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
UBA3-209ENST00000466763 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
UBA3-209ENST00000466763 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
UBA3-209ENST00000466763 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
UBA3-209ENST00000466763 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
UBA3-209ENST00000466763 FAM205AQ6ZU69 1335 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
UBA3-209ENST00000466763 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
UBA3-209ENST00000466763 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 DCTPP1Q9H773 170 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
UBA3-209ENST00000466763 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
UBA3-209ENST00000466763 IFIT2P09913 472 aaKnown RBP17.05■□□□□ 0.32
UBA3-209ENST00000466763 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 POTEJP0CG39 1038 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 GMLQ99445 158 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 TLR7Q9NYK1 1049 aaKnown RBP17.05■□□□□ 0.32
UBA3-209ENST00000466763 HDAC9Q9UKV0 1011 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
UBA3-209ENST00000466763 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
UBA3-209ENST00000466763 TOMM70O94826 608 aa17.04■□□□□ 0.32
UBA3-209ENST00000466763 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
UBA3-209ENST00000466763 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
UBA3-209ENST00000466763 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
UBA3-209ENST00000466763 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
UBA3-209ENST00000466763 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
UBA3-209ENST00000466763 DBNLQ9UJU6 430 aaKnown RBP17.04■□□□□ 0.32
UBA3-209ENST00000466763 SEMA3EO15041 775 aa17.03■□□□□ 0.32
UBA3-209ENST00000466763 UQCRFS1P1P0C7P4 283 aa17.03■□□□□ 0.32
UBA3-209ENST00000466763 FKBP1AP62942 108 aaKnown RBP17.03■□□□□ 0.32
UBA3-209ENST00000466763 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
UBA3-209ENST00000466763 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
UBA3-209ENST00000466763 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
UBA3-209ENST00000466763 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
UBA3-209ENST00000466763 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
UBA3-209ENST00000466763 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
UBA3-209ENST00000466763 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
UBA3-209ENST00000466763 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.32
UBA3-209ENST00000466763 SNRKQ9NRH2 765 aa17.02■□□□□ 0.32
UBA3-209ENST00000466763 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
UBA3-209ENST00000466763 EGFRP00533 1210 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 NEFLP07196 543 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
UBA3-209ENST00000466763 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
UBA3-209ENST00000466763 ANKRD45Q5TZF3 282 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
UBA3-209ENST00000466763 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
UBA3-209ENST00000466763 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
UBA3-209ENST00000466763 DLGAP5Q15398 846 aa17■□□□□ 0.31
UBA3-209ENST00000466763 GRIK5Q16478 980 aa17■□□□□ 0.31
UBA3-209ENST00000466763 MAP1SQ66K74 1059 aaPredicted RBP17■□□□□ 0.31
UBA3-209ENST00000466763 PI16Q6UXB8 463 aa17■□□□□ 0.31
UBA3-209ENST00000466763 SPATA5Q8NB90 893 aa17■□□□□ 0.31
UBA3-209ENST00000466763 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
UBA3-209ENST00000466763 COL1A1P02452 1464 aaPredicted RBP16.99■□□□□ 0.31
UBA3-209ENST00000466763 IGHDP01880 384 aa16.99■□□□□ 0.31
UBA3-209ENST00000466763 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
UBA3-209ENST00000466763 MCAMP43121 646 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms