RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 PPM1EQ8WY54 764 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 CEP89Q96ST8 783 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 COL15A1P39059 1388 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 TUBB4AP04350 444 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-206ENST00000466742 SMC1AQ14683 1233 aaKnown RBP18.03■□□□□ 0.48
ABCF3-206ENST00000466742 ANO6Q4KMQ2 910 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
ABCF3-206ENST00000466742 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 RPS6KA5O75582 802 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 CPP00450 1065 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.48
ABCF3-206ENST00000466742 CCZ1BP86790 482 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 CCZ1P86791 482 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-206ENST00000466742 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 LRRN4CLQ8ND94 238 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 NUP62CLQ9H1M0 184 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 ADAM21Q9UKJ8 722 aa18.02■□□□□ 0.48
ABCF3-206ENST00000466742 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.02■□□□□ 0.47
ABCF3-206ENST00000466742 PATL2C9JE40 543 aaKnown RBP18.01■□□□□ 0.47
ABCF3-206ENST00000466742 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
ABCF3-206ENST00000466742 TBC1D8O95759 1140 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 SYT1P21579 422 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 OSBPL3Q9H4L5 887 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 SUFUQ9UMX1 484 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 TPM1P09493 284 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 MRFAP1L1Q96HT8 127 aa18.01■□□□□ 0.47
ABCF3-206ENST00000466742 EIF3CLB5ME19 914 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
ABCF3-206ENST00000466742 MEX3CQ5U5Q3 659 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 EIF3CQ99613 913 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 TRMT1Q9NXH9 659 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
ABCF3-206ENST00000466742 RBM43Q6ZSC3 357 aaKnown RBP18■□□□□ 0.47
ABCF3-206ENST00000466742 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 SASH3O75995 380 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 CORO7P57737 925 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 UBXN4Q92575 508 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 LMAN1P49257 510 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 CASP7P55210 303 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 SNW1Q13573 536 aaKnown RBP17.99■□□□□ 0.47
ABCF3-206ENST00000466742 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 LEKR1Q6ZMV7 388 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 MMS22LQ6ZRQ5 1243 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 ESYT1Q9BSJ8 1104 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 ZBTB3Q9H5J0 574 aa17.99■□□□□ 0.47
ABCF3-206ENST00000466742 A0A087WZG4 1122 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 CAVIN2O95810 425 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 RPAINQ86UA6 219 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-206ENST00000466742 CWC25Q9NXE8 425 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-206ENST00000466742 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 H7C1W4 665 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 PDE1AP54750 535 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 DNM1Q05193 864 aaKnown RBP17.98■□□□□ 0.47
ABCF3-206ENST00000466742 CCDC158Q5M9N0 1113 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 RHPN1Q8TCX5 695 aa17.98■□□□□ 0.47
ABCF3-206ENST00000466742 ZSCAN16Q9H4T2 348 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-206ENST00000466742 SEC31AO94979 1220 aaKnown RBP17.97■□□□□ 0.47
ABCF3-206ENST00000466742 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
ABCF3-206ENST00000466742 E2F4Q16254 413 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 RABL6Q3YEC7 729 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-206ENST00000466742 UBE3BQ7Z3V4 1068 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-206ENST00000466742 ISCA1Q9BUE6 129 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 AFF2P51816 1311 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 SIK1P57059 783 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 HSP90AB3PQ58FF7 597 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-206ENST00000466742 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
ABCF3-206ENST00000466742 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-206ENST00000466742 ZNF165P49910 485 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 SRRTQ9BXP5 876 aaKnown RBP17.96■□□□□ 0.47
ABCF3-206ENST00000466742 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 STAP2Q9UGK3 403 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.47
ABCF3-206ENST00000466742 PALLDQ8WX93 1383 aa17.96■□□□□ 0.46
ABCF3-206ENST00000466742 A0A0G2JS52 829 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 CCDC189A1A4V9 331 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 KCNQ2O43526 872 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 TDO2P48775 406 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 ERC1Q8IUD2 1116 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 EPB41L2O43491 1005 aaKnown RBP17.95■□□□□ 0.46
ABCF3-206ENST00000466742 MAP2K2P36507 400 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 CAMK4Q16566 473 aa17.95■□□□□ 0.46
ABCF3-206ENST00000466742 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
ABCF3-206ENST00000466742 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms