RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
PMF1-204ENST00000466489 KLRK1P26718 216 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 TXNRD3Q86VQ6 643 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 RHPN1Q8TCX5 695 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 SNX21Q969T3 373 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
PMF1-204ENST00000466489 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
PMF1-204ENST00000466489 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 PSMD14O00487 310 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
PMF1-204ENST00000466489 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 MMP14P50281 582 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
PMF1-204ENST00000466489 AGBL3Q8NEM8 1001 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 C22orf23Q9BZE7 217 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 DCTPP1Q9H773 170 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 HDAC9Q9UKV0 1011 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
PMF1-204ENST00000466489 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 WTIPA6NIX2 430 aaPredicted RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 H7C1D1 291 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 TIMM10P62072 90 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 GTF2IP78347 998 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 NUCB1Q02818 461 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 RSBN1LQ6PCB5 846 aaPredicted RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 AACSQ86V21 672 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
PMF1-204ENST00000466489 DPF2Q92785 391 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
PMF1-204ENST00000466489 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
PMF1-204ENST00000466489 GMPSP49915 693 aaPredicted RBP12.1□□□□□ -0.47
PMF1-204ENST00000466489 BCAMP50895 628 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
PMF1-204ENST00000466489 MFSD14BQ5SR56 506 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 CCDC102BQ68D86 513 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
PMF1-204ENST00000466489 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 MAST3O60307 1309 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 FAM205AQ6ZU69 1335 aa12.1□□□□□ -0.47
PMF1-204ENST00000466489 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
PMF1-204ENST00000466489 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
PMF1-204ENST00000466489 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
PMF1-204ENST00000466489 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
PMF1-204ENST00000466489 ADARB2Q9NS39 739 aaKnown RBP12.09□□□□□ -0.47
PMF1-204ENST00000466489 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
PMF1-204ENST00000466489 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
PMF1-204ENST00000466489 ZBTB22O15209 634 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 ADORA1P30542 326 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 EPHX2P34913 555 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 PHKA1P46020 1223 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 SPTY2D1Q68D10 685 aaPredicted RBP12.08□□□□□ -0.48
PMF1-204ENST00000466489 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
PMF1-204ENST00000466489 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
PMF1-204ENST00000466489 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
PMF1-204ENST00000466489 ZNF646O15015 1829 aaPredicted RBP12.08□□□□□ -0.48
PMF1-204ENST00000466489 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
PMF1-204ENST00000466489 SCNN1DP51172 638 aa12.07□□□□□ -0.48
PMF1-204ENST00000466489 EAPPQ56P03 285 aaPredicted RBP12.07□□□□□ -0.48
PMF1-204ENST00000466489 USP50Q70EL3 339 aaPredicted RBP12.07□□□□□ -0.48
PMF1-204ENST00000466489 EAF2Q96CJ1 260 aaPredicted RBP12.07□□□□□ -0.48
PMF1-204ENST00000466489 DBNDD2Q9BQY9 259 aa12.07□□□□□ -0.48
PMF1-204ENST00000466489 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
PMF1-204ENST00000466489 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
PMF1-204ENST00000466489 MYO1BO43795 1136 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 SLF2Q8IX21 1173 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
PMF1-204ENST00000466489 ZNF512BQ96KM6 892 aaPredicted RBP12.06□□□□□ -0.48
PMF1-204ENST00000466489 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
PMF1-204ENST00000466489 DBNLQ9UJU6 430 aaKnown RBP12.06□□□□□ -0.48
PMF1-204ENST00000466489 JAG2Q9Y219 1238 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
PMF1-204ENST00000466489 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms