RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 MAP3K15Q6ZN16 1313 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 C8orf76Q96K31 380 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 GOLPH3LQ9H4A5 285 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 GOLGA6L19H0YKK7 550 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
SLX4-202ENST00000466154 PHKA1P46020 1223 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 CCDC186Q7Z3E2 898 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 APPBP2Q92624 585 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 A0A1B0GVL5 298 aa19.14■□□□□ 0.66
SLX4-202ENST00000466154 GOLGA6L6A8MZA4 724 aa19.14■□□□□ 0.66
SLX4-202ENST00000466154 DZIP3Q86Y13 1208 aaKnown RBP19.14■□□□□ 0.66
SLX4-202ENST00000466154 SDF4Q9BRK5 362 aa19.14■□□□□ 0.66
SLX4-202ENST00000466154 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.66
SLX4-202ENST00000466154 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.66
SLX4-202ENST00000466154 RFX7Q2KHR2 1363 aa19.14■□□□□ 0.65
SLX4-202ENST00000466154 LRMPQ12912 555 aa19.14■□□□□ 0.65
SLX4-202ENST00000466154 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.65
SLX4-202ENST00000466154 LLPHQ9BRT6 129 aaKnown RBP19.14■□□□□ 0.65
SLX4-202ENST00000466154 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.14■□□□□ 0.65
SLX4-202ENST00000466154 BECN2A8MW95 431 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 CTSWP56202 376 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 GNL2Q13823 731 aaKnown RBP19.13■□□□□ 0.65
SLX4-202ENST00000466154 STK38Q15208 465 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 RRP12Q5JTH9 1297 aaKnown RBP19.13■□□□□ 0.65
SLX4-202ENST00000466154 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 ZNF396Q96N95 335 aaPredicted RBP19.13■□□□□ 0.65
SLX4-202ENST00000466154 MYL10Q9BUA6 226 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 NFXL1Q6ZNB6 911 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 MICU3Q86XE3 530 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 SLC4A9Q96Q91 983 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 FOXP2O15409 715 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 AIFM3Q96NN9 605 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 KCNF1Q9H3M0 494 aa19.13■□□□□ 0.65
SLX4-202ENST00000466154 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 EXOC5O00471 708 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 CCDC82Q8N4S0 544 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 TEX13AQ9BXU3 409 aaPredicted RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 FDPSP14324 419 aaKnown RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 C11orf57Q6ZUT1 292 aaPredicted RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 LMTK3Q96Q04 1460 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 B4E1Z4 1266 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 BIN1O00499 593 aa19.12■□□□□ 0.65
SLX4-202ENST00000466154 ZFYP08048 801 aaPredicted RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 ZRSR1Q15695 479 aaKnown RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
SLX4-202ENST00000466154 ZNF532Q9HCE3 1301 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 ADD1P35611 737 aaKnown RBP19.11■□□□□ 0.65
SLX4-202ENST00000466154 AIDAQ96BJ3 306 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
SLX4-202ENST00000466154 WWC3Q9ULE0 1092 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 RIPOR2Q9Y4F9 1068 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 CLIC4Q9Y696 253 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 PHKBQ93100 1093 aa19.11■□□□□ 0.65
SLX4-202ENST00000466154 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
SLX4-202ENST00000466154 RRP9O43818 475 aaKnown RBP19.1■□□□□ 0.65
SLX4-202ENST00000466154 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 MPHOSPH8Q99549 860 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 MARCKSP29966 332 aaPredicted RBP19.1■□□□□ 0.65
SLX4-202ENST00000466154 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 PKD1L3Q7Z443 1732 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 CSF1RP07333 972 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 CYP19A1P11511 503 aaPredicted RBP19.1■□□□□ 0.65
SLX4-202ENST00000466154 ANTXR2P58335 489 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 CLIP2Q9UDT6 1046 aa19.1■□□□□ 0.65
SLX4-202ENST00000466154 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
SLX4-202ENST00000466154 SENP2Q9HC62 589 aa19.09■□□□□ 0.65
SLX4-202ENST00000466154 FILIP1Q7Z7B0 1213 aa19.09■□□□□ 0.65
SLX4-202ENST00000466154 PCDHA7Q9UN72 937 aa19.09■□□□□ 0.65
SLX4-202ENST00000466154 TBC1D10CQ8IV04 446 aa19.08■□□□□ 0.65
SLX4-202ENST00000466154 ZKSCAN3Q9BRR0 538 aa19.08■□□□□ 0.65
SLX4-202ENST00000466154 PDE8BO95263 885 aa19.08■□□□□ 0.64
SLX4-202ENST00000466154 CTDSPL2Q05D32 466 aa19.08■□□□□ 0.64
SLX4-202ENST00000466154 MAGEB6Q8N7X4 407 aa19.08■□□□□ 0.64
SLX4-202ENST00000466154 RCOR1Q9UKL0 485 aa19.08■□□□□ 0.64
SLX4-202ENST00000466154 DHX16O60231 1041 aaKnown RBP19.08■□□□□ 0.64
SLX4-202ENST00000466154 METAP2P50579 478 aaKnown RBP eCLIP19.07■□□□□ 0.64
SLX4-202ENST00000466154 MB21D2Q8IYB1 491 aaPredicted RBP19.07■□□□□ 0.64
SLX4-202ENST00000466154 GLI3P10071 1580 aa19.07■□□□□ 0.64
SLX4-202ENST00000466154 ADD2P35612 726 aa19.07■□□□□ 0.64
SLX4-202ENST00000466154 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
SLX4-202ENST00000466154 CYB5R4Q7L1T6 521 aa19.07■□□□□ 0.64
SLX4-202ENST00000466154 MIGA1Q8NAN2 632 aa19.07■□□□□ 0.64
SLX4-202ENST00000466154 C16orf45Q96MC5 204 aaPredicted RBP19.07■□□□□ 0.64
SLX4-202ENST00000466154 PDE6AP16499 860 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 ZNF75DP51815 510 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 AGXT2Q9BYV1 514 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 ARMT1Q9H993 441 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 UBN2Q6ZU65 1347 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 NUTM2BA6NNL0 878 aaPredicted RBP19.06■□□□□ 0.64
SLX4-202ENST00000466154 NUTM2EB1AL46 878 aaPredicted RBP19.06■□□□□ 0.64
SLX4-202ENST00000466154 UBE2Q2LH0YL09 131 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 PDE8AO60658 829 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 NDUFA8P51970 172 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 NUTM2AQ8IVF1 878 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms