RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 RGMBQ6NW40 437 aa17.66■□□□□ 0.42
CACNA1C-224ENST00000465934 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
CACNA1C-224ENST00000465934 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
CACNA1C-224ENST00000465934 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
CACNA1C-224ENST00000465934 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
CACNA1C-224ENST00000465934 FAM84BQ96KN1 310 aaPredicted RBP17.65■□□□□ 0.42
CACNA1C-224ENST00000465934 AOX1Q06278 1338 aa17.65■□□□□ 0.42
CACNA1C-224ENST00000465934 MROH5Q6ZUA9 1318 aa17.65■□□□□ 0.42
CACNA1C-224ENST00000465934 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 HIBADHP31937 336 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 ZNF157P51786 506 aaPredicted RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 NOGQ13253 232 aa17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 BEGAINQ9BUH8 593 aa17.64■□□□□ 0.41
CACNA1C-224ENST00000465934 IQSEC3Q9UPP2 1182 aaPredicted RBP17.63■□□□□ 0.41
CACNA1C-224ENST00000465934 PDE8BO95263 885 aa17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 UBTFL1P0CB47 393 aaPredicted RBP17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 MMP14P50281 582 aa17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 DLGAP5Q15398 846 aa17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
CACNA1C-224ENST00000465934 UBE2Q2LH0YL09 131 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 SLC10A3P09131 477 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 GRIK5Q16478 980 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 RASAL3Q86YV0 1011 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 APOBEC3FQ8IUX4 373 aaKnown RBP17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 MEIS3Q99687 375 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
CACNA1C-224ENST00000465934 CLRN2A0PK11 232 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 FKBP1BP68106 108 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 MTMR14Q8NCE2 650 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 FZD1Q9UP38 647 aa17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
CACNA1C-224ENST00000465934 PAPPA2Q9BXP8 1791 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 KIF16BQ96L93 1317 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 EYA2O00167 538 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 BCAR3O75815 825 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 BCAMP50895 628 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 PRKG1Q13976 671 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 SIL1Q9H173 461 aa17.59■□□□□ 0.41
CACNA1C-224ENST00000465934 FGFR2P21802 821 aa17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 TTLL12Q14166 644 aaPredicted RBP17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 DEFB129Q9H1M3 183 aa17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 TTF2Q9UNY4 1162 aaKnown RBP17.58■□□□□ 0.4
CACNA1C-224ENST00000465934 CA12O43570 354 aa17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 TRIM27P14373 513 aa17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 CAVIN4Q5BKX8 364 aa17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 INTS3Q68E01 1043 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-224ENST00000465934 NF2P35240 595 aa17.56■□□□□ 0.4
CACNA1C-224ENST00000465934 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
CACNA1C-224ENST00000465934 CSRNP1Q96S65 589 aa17.56■□□□□ 0.4
CACNA1C-224ENST00000465934 SSC5DA1L4H1 1573 aa17.56■□□□□ 0.4
CACNA1C-224ENST00000465934 FRAT2O75474 233 aaPredicted RBP17.55■□□□□ 0.4
CACNA1C-224ENST00000465934 MYO1BO43795 1136 aa17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 CRKP46108 304 aa17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 TDRD3Q9H7E2 651 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 COL1A1P02452 1464 aaPredicted RBP17.54■□□□□ 0.4
CACNA1C-224ENST00000465934 TRPA1O75762 1119 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 CIAO1O76071 339 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 SLC5A1P13866 664 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 RASA3Q14644 834 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 CDAN1Q8IWY9 1227 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 LPIN2Q92539 896 aa17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 ZNF70Q9UC06 446 aaPredicted RBP17.53■□□□□ 0.4
CACNA1C-224ENST00000465934 LDLRAD1Q5T700 205 aa17.52■□□□□ 0.4
CACNA1C-224ENST00000465934 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.4
CACNA1C-224ENST00000465934 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.4
CACNA1C-224ENST00000465934 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
CACNA1C-224ENST00000465934 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms