RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 CTCFP49711 727 aaPredicted RBP21.54■■□□□ 1.04
TOM1-213ENST00000465529 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
TOM1-213ENST00000465529 MOB2Q70IA6 237 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 VGLL2Q8N8G2 317 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 ZBED3Q96IU2 234 aaPredicted RBP21.54■■□□□ 1.04
TOM1-213ENST00000465529 FAM84BQ96KN1 310 aaPredicted RBP21.54■■□□□ 1.04
TOM1-213ENST00000465529 API5Q9BZZ5 524 aaKnown RBP21.54■■□□□ 1.04
TOM1-213ENST00000465529 TSKSQ9UJT2 592 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 ECM29Q5VYK3 1845 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 ARAP2Q8WZ64 1704 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 AOX1Q06278 1338 aa21.54■■□□□ 1.04
TOM1-213ENST00000465529 HDAC9Q9UKV0 1011 aa21.53■■□□□ 1.04
TOM1-213ENST00000465529 IQSEC3Q9UPP2 1182 aaPredicted RBP21.53■■□□□ 1.04
TOM1-213ENST00000465529 PAPPA2Q9BXP8 1791 aa21.52■■□□□ 1.04
TOM1-213ENST00000465529 BCAR3O75815 825 aa21.52■■□□□ 1.04
TOM1-213ENST00000465529 UBTFL1P0CB47 393 aaPredicted RBP21.52■■□□□ 1.04
TOM1-213ENST00000465529 HIBADHP31937 336 aaKnown RBP21.52■■□□□ 1.04
TOM1-213ENST00000465529 RGMBQ6NW40 437 aa21.52■■□□□ 1.04
TOM1-213ENST00000465529 TDRD7Q8NHU6 1098 aaKnown RBP21.52■■□□□ 1.04
TOM1-213ENST00000465529 MEIS3Q99687 375 aa21.52■■□□□ 1.04
TOM1-213ENST00000465529 FAM155AB1AL88 458 aaPredicted RBP21.51■■□□□ 1.03
TOM1-213ENST00000465529 MAP2K2P36507 400 aa21.51■■□□□ 1.03
TOM1-213ENST00000465529 PTPN12Q05209 780 aaKnown RBP21.51■■□□□ 1.03
TOM1-213ENST00000465529 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
TOM1-213ENST00000465529 PDE8BO95263 885 aa21.5■■□□□ 1.03
TOM1-213ENST00000465529 FAM205AQ6ZU69 1335 aa21.5■■□□□ 1.03
TOM1-213ENST00000465529 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
TOM1-213ENST00000465529 ZNF157P51786 506 aaPredicted RBP21.49■■□□□ 1.03
TOM1-213ENST00000465529 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
TOM1-213ENST00000465529 GRIK5Q16478 980 aa21.49■■□□□ 1.03
TOM1-213ENST00000465529 CFAP100Q494V2 611 aa21.49■■□□□ 1.03
TOM1-213ENST00000465529 SIL1Q9H173 461 aa21.49■■□□□ 1.03
TOM1-213ENST00000465529 PRDM10Q9NQV6 1147 aa21.49■■□□□ 1.03
TOM1-213ENST00000465529 CLRN2A0PK11 232 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 EYA2O00167 538 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 CAPN15O75808 1086 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 FKBP1AP62942 108 aaKnown RBP21.48■■□□□ 1.03
TOM1-213ENST00000465529 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 FBXO33Q7Z6M2 555 aa21.48■■□□□ 1.03
TOM1-213ENST00000465529 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
TOM1-213ENST00000465529 PA2G4Q9UQ80 394 aaKnown RBP21.48■■□□□ 1.03
TOM1-213ENST00000465529 MYH13Q9UKX3 1938 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 UBE2Q2LH0YL09 131 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 TRIM27P14373 513 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 BCAMP50895 628 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 CHAF1AQ13111 956 aaPredicted RBP21.47■■□□□ 1.03
TOM1-213ENST00000465529 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
TOM1-213ENST00000465529 BEGAINQ9BUH8 593 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 FZD1Q9UP38 647 aa21.47■■□□□ 1.03
TOM1-213ENST00000465529 SLC10A3P09131 477 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 FGFR2P21802 821 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 MMP14P50281 582 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 NOGQ13253 232 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 PRKG1Q13976 671 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 INTS3Q68E01 1043 aaKnown RBP21.46■■□□□ 1.03
TOM1-213ENST00000465529 VPS37DQ86XT2 251 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 MTMR14Q8NCE2 650 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 ARHGAP45Q92619 1136 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 CLUAP1Q96AJ1 413 aa21.46■■□□□ 1.03
TOM1-213ENST00000465529 SPDYE2BA6NHP3 402 aa21.45■■□□□ 1.02
TOM1-213ENST00000465529 SPDYE6P0CI01 402 aa21.45■■□□□ 1.02
TOM1-213ENST00000465529 RBM5P52756 815 aaKnown RBP eCLIP21.45■■□□□ 1.02
TOM1-213ENST00000465529 KIF23Q02241 960 aaPredicted RBP21.45■■□□□ 1.02
TOM1-213ENST00000465529 RASAL3Q86YV0 1011 aa21.45■■□□□ 1.02
TOM1-213ENST00000465529 APOBEC3FQ8IUX4 373 aaKnown RBP21.45■■□□□ 1.02
TOM1-213ENST00000465529 TTF2Q9UNY4 1162 aaKnown RBP21.45■■□□□ 1.02
TOM1-213ENST00000465529 SSC5DA1L4H1 1573 aa21.44■■□□□ 1.02
TOM1-213ENST00000465529 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
TOM1-213ENST00000465529 PUM3Q15397 648 aaKnown RBP21.44■■□□□ 1.02
TOM1-213ENST00000465529 VEZTQ9HBM0 779 aa21.44■■□□□ 1.02
TOM1-213ENST00000465529 CASP8AP2Q9UKL3 1982 aa21.43■■□□□ 1.02
TOM1-213ENST00000465529 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
TOM1-213ENST00000465529 ATF7IPQ6VMQ6 1270 aa21.43■■□□□ 1.02
TOM1-213ENST00000465529 CCDC102AQ96A19 550 aa21.43■■□□□ 1.02
TOM1-213ENST00000465529 COL1A1P02452 1464 aaPredicted RBP21.43■■□□□ 1.02
TOM1-213ENST00000465529 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
TOM1-213ENST00000465529 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
TOM1-213ENST00000465529 FKBP1BP68106 108 aa21.42■■□□□ 1.02
TOM1-213ENST00000465529 DEFB129Q9H1M3 183 aa21.42■■□□□ 1.02
TOM1-213ENST00000465529 AKAP11Q9UKA4 1901 aa21.41■■□□□ 1.02
TOM1-213ENST00000465529 SLC5A1P13866 664 aa21.4■■□□□ 1.02
TOM1-213ENST00000465529 NF2P35240 595 aa21.4■■□□□ 1.02
TOM1-213ENST00000465529 CRKP46108 304 aa21.4■■□□□ 1.02
TOM1-213ENST00000465529 LPIN2Q92539 896 aa21.4■■□□□ 1.02
TOM1-213ENST00000465529 TDRD3Q9H7E2 651 aaKnown RBP21.4■■□□□ 1.02
TOM1-213ENST00000465529 IPO8O15397 1037 aaKnown RBP21.39■■□□□ 1.01
TOM1-213ENST00000465529 MYO1BO43795 1136 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 CIAO1O76071 339 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 GNAI3P08754 354 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 MKRN3Q13064 507 aaKnown RBP21.39■■□□□ 1.01
TOM1-213ENST00000465529 ATP2B3Q16720 1220 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.39■■□□□ 1.01
TOM1-213ENST00000465529 ZNF70Q9UC06 446 aaPredicted RBP21.39■■□□□ 1.01
TOM1-213ENST00000465529 SERPINA10Q9UK55 444 aa21.39■■□□□ 1.01
TOM1-213ENST00000465529 CDAN1Q8IWY9 1227 aa21.38■■□□□ 1.01
TOM1-213ENST00000465529 DZIP1LQ8IYY4 767 aaKnown RBP21.38■■□□□ 1.01
TOM1-213ENST00000465529 COPRSQ9NQ92 184 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms