RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TNNI3KQ59H18 835 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 LDHDQ86WU2 507 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 ERC1Q8IUD2 1116 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 FBXW7Q969H0 707 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 XAGE2Q96GT9 111 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 PCDHB15Q9Y5E8 787 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 FPGT-TNNI3KV9GXZ4 949 aa25.09■■□□□ 1.61
SKA3-205ENST00000465471 C1QTNF8P60827 252 aa25.08■■□□□ 1.61
SKA3-205ENST00000465471 TRPM4Q8TD43 1214 aa25.08■■□□□ 1.61
SKA3-205ENST00000465471 IQSEC3Q9UPP2 1182 aaPredicted RBP25.08■■□□□ 1.61
SKA3-205ENST00000465471 EGFRP00533 1210 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 USP17L8P0C7I0 530 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 PHKA1P46020 1223 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 MMP14P50281 582 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
SKA3-205ENST00000465471 FSTL1Q12841 308 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 AAMPQ13685 434 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 CCDC102BQ68D86 513 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 SMC1BQ8NDV3 1235 aa25.07■■□□□ 1.6
SKA3-205ENST00000465471 EAPPQ56P03 285 aaPredicted RBP25.06■■□□□ 1.6
SKA3-205ENST00000465471 JAG2Q9Y219 1238 aa25.06■■□□□ 1.6
SKA3-205ENST00000465471 SEMA3EO15041 775 aa25.05■■□□□ 1.6
SKA3-205ENST00000465471 CHADLQ6NUI6 762 aa25.05■■□□□ 1.6
SKA3-205ENST00000465471 SAMD7Q7Z3H4 446 aa25.05■■□□□ 1.6
SKA3-205ENST00000465471 RHPN1Q8TCX5 695 aa25.05■■□□□ 1.6
SKA3-205ENST00000465471 PGAP2Q9UHJ9 254 aa25.05■■□□□ 1.6
SKA3-205ENST00000465471 RAB11FIP3O75154 756 aa25.04■■□□□ 1.6
SKA3-205ENST00000465471 MFSD14BQ5SR56 506 aa25.04■■□□□ 1.6
SKA3-205ENST00000465471 NEUROD6Q96NK8 337 aa25.04■■□□□ 1.6
SKA3-205ENST00000465471 GNL3LQ9NVN8 582 aaKnown RBP25.04■■□□□ 1.6
SKA3-205ENST00000465471 PDS5AQ29RF7 1337 aaKnown RBP25.04■■□□□ 1.6
SKA3-205ENST00000465471 TBC1D10BQ4KMP7 808 aaPredicted RBP25.03■■□□□ 1.6
SKA3-205ENST00000465471 KIAA0825Q8IV33 1275 aa25.03■■□□□ 1.6
SKA3-205ENST00000465471 TBC1D22AQ8WUA7 517 aa25.03■■□□□ 1.6
SKA3-205ENST00000465471 EAF2Q96CJ1 260 aaPredicted RBP25.03■■□□□ 1.6
SKA3-205ENST00000465471 KIF1BPQ96EK5 621 aa25.03■■□□□ 1.6
SKA3-205ENST00000465471 MYOZ2Q9NPC6 264 aa25.03■■□□□ 1.6
SKA3-205ENST00000465471 FRAT2O75474 233 aaPredicted RBP25.02■■□□□ 1.6
SKA3-205ENST00000465471 ARID4AP29374 1257 aaPredicted RBP25.02■■□□□ 1.6
SKA3-205ENST00000465471 CHAF1AQ13111 956 aaPredicted RBP25.02■■□□□ 1.6
SKA3-205ENST00000465471 KIF4BQ2VIQ3 1234 aa25.02■■□□□ 1.6
SKA3-205ENST00000465471 EXOC6Q8TAG9 804 aa25.02■■□□□ 1.6
SKA3-205ENST00000465471 ZC3H15Q8WU90 426 aaKnown RBP25.02■■□□□ 1.6
SKA3-205ENST00000465471 DBNDD2Q9BQY9 259 aa25.02■■□□□ 1.6
SKA3-205ENST00000465471 DCTPP1Q9H773 170 aa25.02■■□□□ 1.6
SKA3-205ENST00000465471 DBNLQ9UJU6 430 aaKnown RBP25.02■■□□□ 1.6
SKA3-205ENST00000465471 RASGRF1Q13972 1273 aa25.01■■□□□ 1.59
SKA3-205ENST00000465471 OGFOD1Q8N543 542 aa25.01■■□□□ 1.59
SKA3-205ENST00000465471 DENND2AQ9ULE3 1009 aa25.01■■□□□ 1.59
SKA3-205ENST00000465471 AKAP11Q9UKA4 1901 aa25■■□□□ 1.59
SKA3-205ENST00000465471 GRIK5Q16478 980 aa25■■□□□ 1.59
SKA3-205ENST00000465471 WDR66Q8TBY9 1149 aa25■■□□□ 1.59
SKA3-205ENST00000465471 ZBED3Q96IU2 234 aaPredicted RBP25■■□□□ 1.59
SKA3-205ENST00000465471 TLR7Q9NYK1 1049 aaKnown RBP25■■□□□ 1.59
SKA3-205ENST00000465471 SALL1Q9NSC2 1324 aa25■■□□□ 1.59
SKA3-205ENST00000465471 IL1RAPL2Q9NP60 686 aa24.99■■□□□ 1.59
SKA3-205ENST00000465471 HDAC9Q9UKV0 1011 aa24.99■■□□□ 1.59
SKA3-205ENST00000465471 CLEC11AQ9Y240 323 aa24.99■■□□□ 1.59
SKA3-205ENST00000465471 SUGT1Q9Y2Z0 365 aa24.99■■□□□ 1.59
SKA3-205ENST00000465471 ECM29Q5VYK3 1845 aa24.98■■□□□ 1.59
SKA3-205ENST00000465471 ITGBL1O95965 494 aaPredicted RBP24.98■■□□□ 1.59
SKA3-205ENST00000465471 MAP1SQ66K74 1059 aaPredicted RBP24.98■■□□□ 1.59
SKA3-205ENST00000465471 MTMR14Q8NCE2 650 aa24.98■■□□□ 1.59
SKA3-205ENST00000465471 ZNF512BQ96KM6 892 aaPredicted RBP24.98■■□□□ 1.59
SKA3-205ENST00000465471 PASKQ96RG2 1323 aa24.97■■□□□ 1.59
SKA3-205ENST00000465471 HDAC1Q13547 482 aaPredicted RBP24.97■■□□□ 1.59
SKA3-205ENST00000465471 GORABQ5T7V8 394 aa24.97■■□□□ 1.59
SKA3-205ENST00000465471 RBM26Q5T8P6 1007 aaKnown RBP24.97■■□□□ 1.59
SKA3-205ENST00000465471 AACSQ86V21 672 aa24.97■■□□□ 1.59
SKA3-205ENST00000465471 CCDC8Q9H0W5 538 aaPredicted RBP24.97■■□□□ 1.59
SKA3-205ENST00000465471 F8W031 263 aaPredicted RBP24.96■■□□□ 1.59
SKA3-205ENST00000465471 APBB1O00213 710 aa24.96■■□□□ 1.59
SKA3-205ENST00000465471 UQCRFS1P1P0C7P4 283 aa24.96■■□□□ 1.59
SKA3-205ENST00000465471 SCARF1Q14162 830 aa24.96■■□□□ 1.59
SKA3-205ENST00000465471 CNTROBQ8N137 903 aa24.96■■□□□ 1.59
SKA3-205ENST00000465471 CLASRPQ8N2M8 674 aaKnown RBP24.96■■□□□ 1.59
SKA3-205ENST00000465471 HMG20BQ9P0W2 317 aa24.96■■□□□ 1.59
SKA3-205ENST00000465471 TTF2Q9UNY4 1162 aaKnown RBP24.96■■□□□ 1.59
SKA3-205ENST00000465471 ASTN2O75129 1339 aaPredicted RBP24.95■■□□□ 1.58
SKA3-205ENST00000465471 WNT10BO00744 389 aa24.95■■□□□ 1.58
SKA3-205ENST00000465471 MCAMP43121 646 aa24.95■■□□□ 1.58
SKA3-205ENST00000465471 CCDC158Q5M9N0 1113 aa24.95■■□□□ 1.58
SKA3-205ENST00000465471 LRRCC1Q9C099 1032 aa24.95■■□□□ 1.58
SKA3-205ENST00000465471 SERPINA10Q9UK55 444 aa24.95■■□□□ 1.58
SKA3-205ENST00000465471 POLR2AP24928 1970 aaKnown RBP24.94■■□□□ 1.58
SKA3-205ENST00000465471 HDLBPQ00341 1268 aaKnown RBP24.94■■□□□ 1.58
SKA3-205ENST00000465471 NBPF9Q3BBW0 867 aa24.94■■□□□ 1.58
SKA3-205ENST00000465471 SPATA5Q8NB90 893 aa24.94■■□□□ 1.58
SKA3-205ENST00000465471 PITPNM2Q9BZ72 1349 aa24.93■■□□□ 1.58
SKA3-205ENST00000465471 TTC39AQ5SRH9 613 aa24.93■■□□□ 1.58
SKA3-205ENST00000465471 PI16Q6UXB8 463 aa24.93■■□□□ 1.58
SKA3-205ENST00000465471 MRIQ9BWK5 157 aa24.93■■□□□ 1.58
SKA3-205ENST00000465471 GGA3Q9NZ52 723 aa24.93■■□□□ 1.58
SKA3-205ENST00000465471 MAST3O60307 1309 aa24.92■■□□□ 1.58
SKA3-205ENST00000465471 SPDYE2BA6NHP3 402 aa24.92■■□□□ 1.58
SKA3-205ENST00000465471 SPDYE6P0CI01 402 aa24.92■■□□□ 1.58
SKA3-205ENST00000465471 PRDX5P30044 214 aa24.92■■□□□ 1.58
SKA3-205ENST00000465471 IRX6P78412 446 aaPredicted RBP24.92■■□□□ 1.58
SKA3-205ENST00000465471 CFAP100Q494V2 611 aa24.92■■□□□ 1.58
SKA3-205ENST00000465471 ZGPATQ8N5A5 531 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms