RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LRRCC1Q9C099 1032 aa20.83■□□□□ 0.93
USP39-211ENST00000465282 ADORA1P30542 326 aa20.82■□□□□ 0.92
USP39-211ENST00000465282 PNMA8AQ86V59 439 aaPredicted RBP20.82■□□□□ 0.92
USP39-211ENST00000465282 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
USP39-211ENST00000465282 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
USP39-211ENST00000465282 PDS5AQ29RF7 1337 aaKnown RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 H7C1D1 291 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 UQCRFS1P1P0C7P4 283 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 PHKA1P46020 1223 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 CCDC158Q5M9N0 1113 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
USP39-211ENST00000465282 EAF2Q96CJ1 260 aaPredicted RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 TAF1DQ9H5J8 278 aaPredicted RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 ADARB2Q9NS39 739 aaKnown RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 CNOT7Q9UIV1 285 aaKnown RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 ZBTB12Q9Y330 459 aaPredicted RBP20.81■□□□□ 0.92
USP39-211ENST00000465282 KIF3CO14782 793 aa20.8■□□□□ 0.92
USP39-211ENST00000465282 EPHX2P34913 555 aa20.8■□□□□ 0.92
USP39-211ENST00000465282 AACSQ86V21 672 aa20.8■□□□□ 0.92
USP39-211ENST00000465282 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
USP39-211ENST00000465282 OGFOD1Q8N543 542 aa20.8■□□□□ 0.92
USP39-211ENST00000465282 ZNF512BQ96KM6 892 aaPredicted RBP20.8■□□□□ 0.92
USP39-211ENST00000465282 SUGT1Q9Y2Z0 365 aa20.8■□□□□ 0.92
USP39-211ENST00000465282 APBB1O00213 710 aa20.79■□□□□ 0.92
USP39-211ENST00000465282 USP17L8P0C7I0 530 aa20.79■□□□□ 0.92
USP39-211ENST00000465282 ARID4AP29374 1257 aaPredicted RBP20.79■□□□□ 0.92
USP39-211ENST00000465282 USP50Q70EL3 339 aaPredicted RBP20.79■□□□□ 0.92
USP39-211ENST00000465282 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
USP39-211ENST00000465282 IL1RAPL2Q9NP60 686 aa20.79■□□□□ 0.92
USP39-211ENST00000465282 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
USP39-211ENST00000465282 EPS15P42566 896 aa20.78■□□□□ 0.92
USP39-211ENST00000465282 ZNF280AP59817 542 aaPredicted RBP20.78■□□□□ 0.92
USP39-211ENST00000465282 MFSD14BQ5SR56 506 aa20.78■□□□□ 0.92
USP39-211ENST00000465282 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
USP39-211ENST00000465282 DBNLQ9UJU6 430 aaKnown RBP20.78■□□□□ 0.92
USP39-211ENST00000465282 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
USP39-211ENST00000465282 IQSEC3Q9UPP2 1182 aaPredicted RBP20.78■□□□□ 0.92
USP39-211ENST00000465282 SALL1Q9NSC2 1324 aa20.78■□□□□ 0.92
USP39-211ENST00000465282 TTC39AQ5SRH9 613 aa20.77■□□□□ 0.92
USP39-211ENST00000465282 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
USP39-211ENST00000465282 CCDC8Q9H0W5 538 aaPredicted RBP20.77■□□□□ 0.92
USP39-211ENST00000465282 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
USP39-211ENST00000465282 TOMM70O94826 608 aa20.76■□□□□ 0.91
USP39-211ENST00000465282 NEFLP07196 543 aa20.76■□□□□ 0.91
USP39-211ENST00000465282 CHAF1AQ13111 956 aaPredicted RBP20.76■□□□□ 0.91
USP39-211ENST00000465282 CERS5Q8N5B7 392 aa20.76■□□□□ 0.91
USP39-211ENST00000465282 ZBTB47Q9UFB7 747 aaPredicted RBP20.76■□□□□ 0.91
USP39-211ENST00000465282 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
USP39-211ENST00000465282 SMC5Q8IY18 1101 aa20.75■□□□□ 0.91
USP39-211ENST00000465282 ZC3H15Q8WU90 426 aaKnown RBP20.75■□□□□ 0.91
USP39-211ENST00000465282 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
USP39-211ENST00000465282 IGSF3O75054 1194 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 LDHDQ86WU2 507 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 KIAA0825Q8IV33 1275 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 SPATA5Q8NB90 893 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 RBM46Q8TBY0 533 aaKnown RBP20.74■□□□□ 0.91
USP39-211ENST00000465282 MRIQ9BWK5 157 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 ADAMTSL1Q8N6G6 1762 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 MAST3O60307 1309 aa20.74■□□□□ 0.91
USP39-211ENST00000465282 HDLBPQ00341 1268 aaKnown RBP20.73■□□□□ 0.91
USP39-211ENST00000465282 SPTY2D1Q68D10 685 aaPredicted RBP20.73■□□□□ 0.91
USP39-211ENST00000465282 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.73■□□□□ 0.91
USP39-211ENST00000465282 MYOZ2Q9NPC6 264 aa20.73■□□□□ 0.91
USP39-211ENST00000465282 TLR7Q9NYK1 1049 aaKnown RBP20.73■□□□□ 0.91
USP39-211ENST00000465282 HMG20BQ9P0W2 317 aa20.73■□□□□ 0.91
USP39-211ENST00000465282 COL1A1P02452 1464 aaPredicted RBP20.73■□□□□ 0.91
USP39-211ENST00000465282 IGHDP01880 384 aa20.72■□□□□ 0.91
USP39-211ENST00000465282 MCAMP43121 646 aa20.72■□□□□ 0.91
USP39-211ENST00000465282 MTMR14Q8NCE2 650 aa20.72■□□□□ 0.91
USP39-211ENST00000465282 TTF2Q9UNY4 1162 aaKnown RBP20.72■□□□□ 0.91
USP39-211ENST00000465282 SMARCA5O60264 1052 aaPredicted RBP20.71■□□□□ 0.91
USP39-211ENST00000465282 KIF4BQ2VIQ3 1234 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 EAPPQ56P03 285 aaPredicted RBP20.71■□□□□ 0.91
USP39-211ENST00000465282 ANKRD45Q5TZF3 282 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 SAMD7Q7Z3H4 446 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 GPATCH3Q96I76 525 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 PGAP2Q9UHJ9 254 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 SERPINA10Q9UK55 444 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 ECM29Q5VYK3 1845 aa20.71■□□□□ 0.91
USP39-211ENST00000465282 SHTN1A0MZ66 631 aa20.7■□□□□ 0.9
USP39-211ENST00000465282 LDHBP07195 334 aaKnown RBP20.7■□□□□ 0.9
USP39-211ENST00000465282 FSTL1Q12841 308 aa20.7■□□□□ 0.9
USP39-211ENST00000465282 TBC1D10BQ4KMP7 808 aaPredicted RBP20.7■□□□□ 0.9
USP39-211ENST00000465282 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
USP39-211ENST00000465282 ATP5JP18859 108 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 SCARF1Q14162 830 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 CHADLQ6NUI6 762 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 TRPM4Q8TD43 1214 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 CLEC11AQ9Y240 323 aa20.69■□□□□ 0.9
USP39-211ENST00000465282 POLR2AP24928 1970 aaKnown RBP20.68■□□□□ 0.9
USP39-211ENST00000465282 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
USP39-211ENST00000465282 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
USP39-211ENST00000465282 DLGAP5Q15398 846 aa20.68■□□□□ 0.9
USP39-211ENST00000465282 RBM26Q5T8P6 1007 aaKnown RBP20.68■□□□□ 0.9
USP39-211ENST00000465282 SLF2Q8IX21 1173 aa20.68■□□□□ 0.9
USP39-211ENST00000465282 ECHDC1Q9NTX5 307 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms