RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TAF5LO75529 589 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 IL1R1P14778 569 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 TTLL12Q14166 644 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-207ENST00000465209 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 BEND3Q5T5X7 828 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 SPRYD7Q5W111 196 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 DEFB129Q9H1M3 183 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 HDAC9Q9UKV0 1011 aa13.97□□□□□ -0.17
COL11A1-207ENST00000465209 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
COL11A1-207ENST00000465209 F6X3S4 739 aa13.96□□□□□ -0.17
COL11A1-207ENST00000465209 FKBP1AP62942 108 aaKnown RBP13.96□□□□□ -0.17
COL11A1-207ENST00000465209 SREBF2Q12772 1141 aa13.96□□□□□ -0.17
COL11A1-207ENST00000465209 PRKG1Q13976 671 aa13.96□□□□□ -0.17
COL11A1-207ENST00000465209 ARMC9Q7Z3E5 817 aa13.96□□□□□ -0.17
COL11A1-207ENST00000465209 HELBQ8NG08 1087 aaPredicted RBP13.96□□□□□ -0.17
COL11A1-207ENST00000465209 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
COL11A1-207ENST00000465209 ANGEL1Q9UNK9 670 aaKnown RBP13.96□□□□□ -0.17
COL11A1-207ENST00000465209 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
COL11A1-207ENST00000465209 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
COL11A1-207ENST00000465209 FBXO46Q6PJ61 603 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-207ENST00000465209 PPP2R3BQ9Y5P8 575 aa13.95□□□□□ -0.18
COL11A1-207ENST00000465209 KCNJ4P48050 445 aa13.94□□□□□ -0.18
COL11A1-207ENST00000465209 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
COL11A1-207ENST00000465209 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
COL11A1-207ENST00000465209 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
COL11A1-207ENST00000465209 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
COL11A1-207ENST00000465209 CLMNQ96JQ2 1002 aa13.94□□□□□ -0.18
COL11A1-207ENST00000465209 PRMT6Q96LA8 375 aaPredicted RBP13.94□□□□□ -0.18
COL11A1-207ENST00000465209 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL11A1-207ENST00000465209 FKTNO75072 461 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 ZBTB48P10074 688 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-207ENST00000465209 GJA5P36382 358 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 LMBR1LQ6UX01 489 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 WNK4Q96J92 1243 aa13.93□□□□□ -0.18
COL11A1-207ENST00000465209 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-207ENST00000465209 FAM205AQ6ZU69 1335 aa13.92□□□□□ -0.18
COL11A1-207ENST00000465209 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
COL11A1-207ENST00000465209 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
COL11A1-207ENST00000465209 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
COL11A1-207ENST00000465209 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
COL11A1-207ENST00000465209 KAZALD1Q96I82 304 aa13.92□□□□□ -0.18
COL11A1-207ENST00000465209 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
COL11A1-207ENST00000465209 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
COL11A1-207ENST00000465209 GRM8O00222 908 aa13.91□□□□□ -0.18
COL11A1-207ENST00000465209 ALDH1A1P00352 501 aa13.91□□□□□ -0.18
COL11A1-207ENST00000465209 CAP1Q01518 475 aa13.91□□□□□ -0.18
COL11A1-207ENST00000465209 NBPF12Q5TAG4 269 aaPredicted RBP13.91□□□□□ -0.18
COL11A1-207ENST00000465209 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
COL11A1-207ENST00000465209 USP2O75604 605 aaPredicted RBP13.9□□□□□ -0.18
COL11A1-207ENST00000465209 INHBEP58166 350 aa13.9□□□□□ -0.18
COL11A1-207ENST00000465209 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
COL11A1-207ENST00000465209 TDRD7Q8NHU6 1098 aaKnown RBP13.9□□□□□ -0.18
COL11A1-207ENST00000465209 TEPSINQ96N21 525 aa13.9□□□□□ -0.18
COL11A1-207ENST00000465209 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
COL11A1-207ENST00000465209 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
COL11A1-207ENST00000465209 PPP1R12BO60237 982 aaPredicted RBP13.89□□□□□ -0.19
COL11A1-207ENST00000465209 RASA3Q14644 834 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 CCDC57Q2TAC2 916 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 OTOP1Q7RTM1 612 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 SLC10A4Q96EP9 437 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 PTPN18Q99952 460 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 MRS2Q9HD23 443 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 UTYO14607 1347 aa13.89□□□□□ -0.19
COL11A1-207ENST00000465209 MYO1BO43795 1136 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 UBE4AQ14139 1066 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 SUCLG2Q96I99 432 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 FAM84BQ96KN1 310 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-207ENST00000465209 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
COL11A1-207ENST00000465209 SERPINA10Q9UK55 444 aa13.88□□□□□ -0.19
COL11A1-207ENST00000465209 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-207ENST00000465209 ZSWIM8A7E2V4 1837 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 GYG1P46976 350 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 CRHR2Q13324 411 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 GRIK5Q16478 980 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 ZNF70Q9UC06 446 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-207ENST00000465209 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
COL11A1-207ENST00000465209 PLIN1O60240 522 aa13.86□□□□□ -0.19
COL11A1-207ENST00000465209 NBPF7P0C2Y1 421 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-207ENST00000465209 IREB2P48200 963 aaKnown RBP13.86□□□□□ -0.19
COL11A1-207ENST00000465209 RABL6Q3YEC7 729 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-207ENST00000465209 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-207ENST00000465209 ANKRD13AQ8IZ07 590 aa13.86□□□□□ -0.19
COL11A1-207ENST00000465209 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
COL11A1-207ENST00000465209 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
COL11A1-207ENST00000465209 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms