RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TTLL7Q6ZT98 887 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
HPS4-208ENST00000464362 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 XAGE2Q96GT9 111 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 CABP5Q9NP86 173 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ZDHHC9Q9Y397 364 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 OSBPL3Q9H4L5 887 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 JADE2Q9NQC1 790 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ZNF202O95125 648 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 RHOXF2BP0C7M4 288 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ERCC3P19447 782 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
HPS4-208ENST00000464362 CCT6AP40227 531 aaKnown RBP10.39□□□□□ -0.75
HPS4-208ENST00000464362 ODF2Q5BJF6 829 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 BMP2KQ9NSY1 1161 aaPredicted RBP10.39□□□□□ -0.75
HPS4-208ENST00000464362 AOX1Q06278 1338 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 E7EWF7 191 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 MYO1BO43795 1136 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 YEATS4O95619 227 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 CUL4AQ13619 759 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 LRRC24Q50LG9 513 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 IFIT1BQ5T764 474 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 SPTY2D1Q68D10 685 aaPredicted RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 STAP2Q9UGK3 403 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 DBNLQ9UJU6 430 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 KCNJ14Q9UNX9 436 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 TRIM75PA6NK02 468 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 TRIM21P19474 475 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 LONRF3Q496Y0 759 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 TAX1BP1Q86VP1 789 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 TM6SF1Q9BZW5 370 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 XPO4Q9C0E2 1151 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 ARMT1Q9H993 441 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 TRPM1Q7Z4N2 1603 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 POLR2DO15514 142 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 MYL5Q02045 173 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 ZNF827Q17R98 1081 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 CARD6Q9BX69 1037 aa10.38□□□□□ -0.75
HPS4-208ENST00000464362 SEC63Q9UGP8 760 aaKnown RBP10.38□□□□□ -0.75
HPS4-208ENST00000464362 NIP7Q9Y221 180 aaKnown RBP eCLIP10.38□□□□□ -0.75
HPS4-208ENST00000464362 FANCCQ00597 558 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 PPARDQ03181 441 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 ZNF174Q15697 407 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 ESR2Q92731 530 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 CAPZA3Q96KX2 299 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 VWA3AA6NCI4 1184 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 CYP21A2P08686 494 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 UQCRFS1P1P0C7P4 283 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 ITGA6P23229 1130 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 MCM7P33993 719 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 FAM107BQ9H098 131 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 ZNF215Q9UL58 517 aaPredicted RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 GUCA1BQ9UMX6 200 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 RGS12O14924 1447 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 HOXB7P09629 217 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 CCDC96Q2M329 555 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 DIS3L2Q8IYB7 885 aaKnown RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 ZNF397Q8NF99 534 aaPredicted RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 PLBD2Q8NHP8 589 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.37□□□□□ -0.75
HPS4-208ENST00000464362 PUS3Q9BZE2 481 aaKnown RBP10.37□□□□□ -0.75
HPS4-208ENST00000464362 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
HPS4-208ENST00000464362 ZNF569Q5MCW4 686 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 KAT14Q9H8E8 782 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 AKR1B10O60218 316 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 ZPR1O75312 459 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 ATP5JP18859 108 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 EVCP57679 992 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 TCERG1LQ5VWI1 586 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 VPS16Q9H269 839 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 KCNH3Q9ULD8 1083 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 ANGEL1Q9UNK9 670 aaKnown RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 ZNF652Q9Y2D9 606 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 KRT40Q6A162 431 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 NAA16Q6N069 864 aaPredicted RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 HEATR3Q7Z4Q2 680 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 EEF2KMTQ96G04 330 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms