RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 BCAMP50895 628 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 MTX1Q13505 466 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 DZIP1LQ8IYY4 767 aaKnown RBP16.18■□□□□ 0.18
XRN1-203ENST00000463916 COPRSQ9NQ92 184 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 PCDHAC2Q9Y5I4 1007 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
XRN1-203ENST00000463916 CIAO1O76071 339 aa16.17■□□□□ 0.18
XRN1-203ENST00000463916 GNAI2P04899 355 aa16.17■□□□□ 0.18
XRN1-203ENST00000463916 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
XRN1-203ENST00000463916 DEFB115Q30KQ5 88 aa16.17■□□□□ 0.18
XRN1-203ENST00000463916 FAM205AQ6ZU69 1335 aa16.17■□□□□ 0.18
XRN1-203ENST00000463916 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
XRN1-203ENST00000463916 SAPCD2Q86UD0 394 aa16.16■□□□□ 0.18
XRN1-203ENST00000463916 SULF1Q8IWU6 871 aa16.16■□□□□ 0.18
XRN1-203ENST00000463916 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
XRN1-203ENST00000463916 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
XRN1-203ENST00000463916 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
XRN1-203ENST00000463916 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
XRN1-203ENST00000463916 FKBP1AP62942 108 aaKnown RBP16.15■□□□□ 0.18
XRN1-203ENST00000463916 GRIK5Q16478 980 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
XRN1-203ENST00000463916 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
XRN1-203ENST00000463916 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
XRN1-203ENST00000463916 MFSD14BQ5SR56 506 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 LPIN2Q92539 896 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 CEP126Q9P2H0 1117 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 HDAC9Q9UKV0 1011 aa16.15■□□□□ 0.18
XRN1-203ENST00000463916 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
XRN1-203ENST00000463916 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 AOX1Q06278 1338 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 PITPNM2Q9BZ72 1349 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 MMP14P50281 582 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 CYP4F22Q6NT55 531 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
XRN1-203ENST00000463916 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
XRN1-203ENST00000463916 SLC5A1P13866 664 aa16.13■□□□□ 0.17
XRN1-203ENST00000463916 CHAF1AQ13111 956 aaPredicted RBP16.13■□□□□ 0.17
XRN1-203ENST00000463916 ATP2B3Q16720 1220 aa16.13■□□□□ 0.17
XRN1-203ENST00000463916 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
XRN1-203ENST00000463916 DLGAP5Q15398 846 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 MTMR14Q8NCE2 650 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
XRN1-203ENST00000463916 TIMM10P62072 90 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 TFCP2Q12800 502 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 GRM1Q13255 1194 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
XRN1-203ENST00000463916 HSPA1AP0DMV8 641 aaKnown RBP16.11■□□□□ 0.17
XRN1-203ENST00000463916 HSPA1BP0DMV9 641 aaKnown RBP16.11■□□□□ 0.17
XRN1-203ENST00000463916 ADORA1P30542 326 aa16.11■□□□□ 0.17
XRN1-203ENST00000463916 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
XRN1-203ENST00000463916 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
XRN1-203ENST00000463916 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
XRN1-203ENST00000463916 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
XRN1-203ENST00000463916 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
XRN1-203ENST00000463916 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
XRN1-203ENST00000463916 HUNKP57058 714 aa16.1■□□□□ 0.17
XRN1-203ENST00000463916 POLA2Q14181 598 aa16.1■□□□□ 0.17
XRN1-203ENST00000463916 CLRN2A0PK11 232 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 AOC2O75106 756 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 PHKA1P46020 1223 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 RBM5P52756 815 aaKnown RBP eCLIP16.09■□□□□ 0.17
XRN1-203ENST00000463916 MOB2Q70IA6 237 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 C2orf69Q8N8R5 385 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
XRN1-203ENST00000463916 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.17
XRN1-203ENST00000463916 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
XRN1-203ENST00000463916 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
XRN1-203ENST00000463916 CRKP46108 304 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 TBC1D22AQ8WUA7 517 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 ECE1P42892 770 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 APOBEC3FQ8IUX4 373 aaKnown RBP16.07■□□□□ 0.16
XRN1-203ENST00000463916 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 ZIC5Q96T25 663 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 DEFB129Q9H1M3 183 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 WBP1LQ9NX94 342 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 COG6Q9Y2V7 657 aa16.07■□□□□ 0.16
XRN1-203ENST00000463916 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
XRN1-203ENST00000463916 TDRD3Q9H7E2 651 aaKnown RBP16.06■□□□□ 0.16
XRN1-203ENST00000463916 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
XRN1-203ENST00000463916 CEP85Q6P2H3 762 aa16.06■□□□□ 0.16
XRN1-203ENST00000463916 VEZTQ9HBM0 779 aa16.06■□□□□ 0.16
XRN1-203ENST00000463916 AKAP2Q9Y2D5 859 aa16.06■□□□□ 0.16
XRN1-203ENST00000463916 ECM29Q5VYK3 1845 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 FAM155AB1AL88 458 aaPredicted RBP16.05■□□□□ 0.16
XRN1-203ENST00000463916 FOXN1O15353 648 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 MYO1BO43795 1136 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 RGMBQ6NW40 437 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms