RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
SEMA3D-203ENST00000463315 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
SEMA3D-203ENST00000463315 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
SEMA3D-203ENST00000463315 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
SEMA3D-203ENST00000463315 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 HMMRO75330 724 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 ZNF280AP59817 542 aaPredicted RBP16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 GPR108Q9NPR9 543 aa16.97■□□□□ 0.31
SEMA3D-203ENST00000463315 GYG1P46976 350 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 GTF2IP78347 998 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 AAMPQ13685 434 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 ADAMTSL1Q8N6G6 1762 aa16.96■□□□□ 0.31
SEMA3D-203ENST00000463315 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
SEMA3D-203ENST00000463315 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
SEMA3D-203ENST00000463315 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
SEMA3D-203ENST00000463315 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
SEMA3D-203ENST00000463315 SEMA3EO15041 775 aa16.94■□□□□ 0.3
SEMA3D-203ENST00000463315 TFCP2Q12800 502 aa16.94■□□□□ 0.3
SEMA3D-203ENST00000463315 EAPPQ56P03 285 aaPredicted RBP16.94■□□□□ 0.3
SEMA3D-203ENST00000463315 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
SEMA3D-203ENST00000463315 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
SEMA3D-203ENST00000463315 BCAMP50895 628 aa16.93■□□□□ 0.3
SEMA3D-203ENST00000463315 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
SEMA3D-203ENST00000463315 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
SEMA3D-203ENST00000463315 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
SEMA3D-203ENST00000463315 A0A1B0GUL7 405 aa16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 SIRT2Q8IXJ6 389 aa16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
SEMA3D-203ENST00000463315 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 HSPA6P17066 643 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 TIMM10P62072 90 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
SEMA3D-203ENST00000463315 ARAP2Q8WZ64 1704 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 RAB11FIP3O75154 756 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 MFSD14BQ5SR56 506 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 MTMR14Q8NCE2 650 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
SEMA3D-203ENST00000463315 ITGBL1O95965 494 aaPredicted RBP16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 CCDC102BQ68D86 513 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 SALL1Q9NSC2 1324 aa16.89■□□□□ 0.29
SEMA3D-203ENST00000463315 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 APLP1P51693 650 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 TBC1D10BQ4KMP7 808 aaPredicted RBP16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 PIP4P2Q8N4L2 257 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 MXD3Q9BW11 206 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 PASKQ96RG2 1323 aa16.88■□□□□ 0.29
SEMA3D-203ENST00000463315 IGSF3O75054 1194 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 PHKA1P46020 1223 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 ZBED3Q96IU2 234 aaPredicted RBP16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 ZNF512BQ96KM6 892 aaPredicted RBP16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 MAST3O60307 1309 aa16.87■□□□□ 0.29
SEMA3D-203ENST00000463315 EGFRP00533 1210 aa16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 ADORA1P30542 326 aa16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 MAP1SQ66K74 1059 aaPredicted RBP16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
SEMA3D-203ENST00000463315 WNT10BO00744 389 aa16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 SCARF1Q14162 830 aa16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 CCDC158Q5M9N0 1113 aa16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 RBM26Q5T8P6 1007 aaKnown RBP16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 IQSEC3Q9UPP2 1182 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-203ENST00000463315 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
SEMA3D-203ENST00000463315 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms