RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 SSC5DA1L4H1 1573 aa7.24□□□□□ -1.25
CCR9-205ENST00000463197 UTYO14607 1347 aa7.24□□□□□ -1.25
CCR9-205ENST00000463197 POLR2AP24928 1970 aaKnown RBP7.23□□□□□ -1.25
CCR9-205ENST00000463197 CLRN2A0PK11 232 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 PLIN1O60240 522 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 GJA5P36382 358 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 GYG1P46976 350 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 IFIT5Q13325 482 aaKnown RBP7.23□□□□□ -1.25
CCR9-205ENST00000463197 NBPF12Q5TAG4 269 aaPredicted RBP7.23□□□□□ -1.25
CCR9-205ENST00000463197 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 LDHAL6AQ6ZMR3 332 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 MTMR14Q8NCE2 650 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 TDRD7Q8NHU6 1098 aaKnown RBP7.23□□□□□ -1.25
CCR9-205ENST00000463197 CLMNQ96JQ2 1002 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 DEFB129Q9H1M3 183 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 MYH16Q9H6N6 1097 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 SAGE1Q9NXZ1 904 aa7.23□□□□□ -1.25
CCR9-205ENST00000463197 SPDYE2BA6NHP3 402 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 USP2O75604 605 aaPredicted RBP7.22□□□□□ -1.25
CCR9-205ENST00000463197 SPDYE6P0CI01 402 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 RFX5P48382 616 aaPredicted RBP7.22□□□□□ -1.25
CCR9-205ENST00000463197 FKBP1BP68106 108 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 RABL6Q3YEC7 729 aaPredicted RBP7.22□□□□□ -1.25
CCR9-205ENST00000463197 CFAP100Q494V2 611 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 FBXO33Q7Z6M2 555 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 TRMT2AQ8IZ69 625 aaKnown RBP7.22□□□□□ -1.25
CCR9-205ENST00000463197 VGLL2Q8N8G2 317 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 ZNF296Q8WUU4 475 aaPredicted RBP7.22□□□□□ -1.25
CCR9-205ENST00000463197 SSH1Q8WYL5 1049 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 TEPSINQ96N21 525 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 PTPN18Q99952 460 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 USP44Q9H0E7 712 aa7.22□□□□□ -1.25
CCR9-205ENST00000463197 ALDH1L1O75891 902 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 SLFN5Q08AF3 891 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 MAP3K11Q16584 847 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 SPRYD7Q5W111 196 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 OGFOD1Q8N543 542 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 CNKSR2Q8WXI2 1034 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 BICC1Q9H694 974 aaKnown RBP7.21□□□□□ -1.26
CCR9-205ENST00000463197 ANGEL1Q9UNK9 670 aaKnown RBP7.21□□□□□ -1.26
CCR9-205ENST00000463197 IQSEC3Q9UPP2 1182 aaPredicted RBP7.21□□□□□ -1.26
CCR9-205ENST00000463197 CHMP3Q9Y3E7 222 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 FAM205AQ6ZU69 1335 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 MYO3BQ8WXR4 1341 aa7.21□□□□□ -1.26
CCR9-205ENST00000463197 PSME4Q14997 1843 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 GPR25O00155 361 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 IGF2BP3O00425 579 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCR9-205ENST00000463197 FGFR2P21802 821 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 KCNJ4P48050 445 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 BCAMP50895 628 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 SOX10P56693 466 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 FKBP1AP62942 108 aaKnown RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 MLLT1Q03111 559 aaPredicted RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 RASA3Q14644 834 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 DLGAP5Q15398 846 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 CCDC57Q2TAC2 916 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 SRCIN1Q9C0H9 1055 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 TDRD3Q9H7E2 651 aaKnown RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 CNNM1Q9NRU3 951 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 C9orf78Q9NZ63 289 aaPredicted RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 ZNF70Q9UC06 446 aaPredicted RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.2□□□□□ -1.26
CCR9-205ENST00000463197 CASP8AP2Q9UKL3 1982 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 SPEF2Q9C093 1822 aa7.2□□□□□ -1.26
CCR9-205ENST00000463197 PAPPA2Q9BXP8 1791 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 HIBADHP31937 336 aaKnown RBP7.19□□□□□ -1.26
CCR9-205ENST00000463197 MMP14P50281 582 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 UBE4AQ14139 1066 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 TTLL12Q14166 644 aaPredicted RBP7.19□□□□□ -1.26
CCR9-205ENST00000463197 SPDYE2Q495Y8 402 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
CCR9-205ENST00000463197 ATG9AQ7Z3C6 839 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 CTU1Q7Z7A3 348 aaKnown RBP7.19□□□□□ -1.26
CCR9-205ENST00000463197 WNK4Q96J92 1243 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 MS4A4AQ96JQ5 239 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 CFHR5Q9BXR6 569 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 HDAC9Q9UKV0 1011 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 HPS5Q9UPZ3 1129 aa7.19□□□□□ -1.26
CCR9-205ENST00000463197 TESPA1A2RU30 521 aaPredicted RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 PDE8BO95263 885 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 CRKP46108 304 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 CACNB3P54284 484 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 MFSD14BQ5SR56 506 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 APOBEC3HQ6NTF7 200 aaKnown RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 ARMC9Q7Z3E5 817 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 ZNF804AQ7Z570 1209 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 APOBEC3FQ8IUX4 373 aaKnown RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 REM2Q8IYK8 340 aaPredicted RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 DZIP1LQ8IYY4 767 aaKnown RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 SLC10A4Q96EP9 437 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 TMEM39BQ9GZU3 492 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 VEZTQ9HBM0 779 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 TTF2Q9UNY4 1162 aaKnown RBP7.18□□□□□ -1.26
CCR9-205ENST00000463197 TNNQ9UQP3 1299 aa7.18□□□□□ -1.26
CCR9-205ENST00000463197 TCP10L2B9ZVM9 353 aa7.17□□□□□ -1.26
CCR9-205ENST00000463197 RBM5P52756 815 aaKnown RBP eCLIP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms