RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ANGEL1Q9UNK9 670 aaKnown RBP25.14■■□□□ 1.62
VARS-221ENST00000463184 HPS5Q9UPZ3 1129 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 CHMP3Q9Y3E7 222 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 FKBP1AP62942 108 aaKnown RBP25.13■■□□□ 1.61
VARS-221ENST00000463184 CERS5Q8N5B7 392 aa25.13■■□□□ 1.61
VARS-221ENST00000463184 PPP2R3BQ9Y5P8 575 aa25.13■■□□□ 1.61
VARS-221ENST00000463184 F6X3S4 739 aa25.12■■□□□ 1.61
VARS-221ENST00000463184 MAP3K11Q16584 847 aa25.12■■□□□ 1.61
VARS-221ENST00000463184 SPRYD7Q5W111 196 aa25.12■■□□□ 1.61
VARS-221ENST00000463184 SALL2Q9Y467 1007 aaPredicted RBP25.12■■□□□ 1.61
VARS-221ENST00000463184 TNRC18O15417 2968 aaPredicted RBP25.12■■□□□ 1.61
VARS-221ENST00000463184 MYO1BO43795 1136 aa25.11■■□□□ 1.61
VARS-221ENST00000463184 CCDC57Q2TAC2 916 aa25.11■■□□□ 1.61
VARS-221ENST00000463184 LMBR1LQ6UX01 489 aa25.11■■□□□ 1.61
VARS-221ENST00000463184 ANP32CO43423 234 aa25.1■■□□□ 1.61
VARS-221ENST00000463184 PPP1R12BO60237 982 aaPredicted RBP25.1■■□□□ 1.61
VARS-221ENST00000463184 ALDH1A1P00352 501 aa25.1■■□□□ 1.61
VARS-221ENST00000463184 INHBEP58166 350 aa25.1■■□□□ 1.61
VARS-221ENST00000463184 SLC10A4Q96EP9 437 aa25.1■■□□□ 1.61
VARS-221ENST00000463184 FKTNO75072 461 aa25.09■■□□□ 1.61
VARS-221ENST00000463184 CFAP100Q494V2 611 aa25.09■■□□□ 1.61
VARS-221ENST00000463184 TAF7LQ5H9L4 462 aa25.09■■□□□ 1.61
VARS-221ENST00000463184 LDHAL6AQ6ZMR3 332 aa25.09■■□□□ 1.61
VARS-221ENST00000463184 SPDYE2BA6NHP3 402 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 MANSC4A6NHS7 340 aaPredicted RBP25.08■■□□□ 1.61
VARS-221ENST00000463184 UNCXA6NJT0 531 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 F8W031 263 aaPredicted RBP25.08■■□□□ 1.61
VARS-221ENST00000463184 GRM8O00222 908 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 SPDYE6P0CI01 402 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 SUPT20HL1Q3ZLR7 823 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 EPHA10Q5JZY3 1008 aa25.08■■□□□ 1.61
VARS-221ENST00000463184 FBXO46Q6PJ61 603 aaPredicted RBP25.07■■□□□ 1.6
VARS-221ENST00000463184 ZNF594Q96JF6 807 aaPredicted RBP25.07■■□□□ 1.6
VARS-221ENST00000463184 PRMT6Q96LA8 375 aaPredicted RBP25.07■■□□□ 1.6
VARS-221ENST00000463184 CNNM1Q9NRU3 951 aa25.07■■□□□ 1.6
VARS-221ENST00000463184 C9orf78Q9NZ63 289 aaPredicted RBP25.07■■□□□ 1.6
VARS-221ENST00000463184 FZD1Q9UP38 647 aa25.07■■□□□ 1.6
VARS-221ENST00000463184 PCDHAC2Q9Y5I4 1007 aa25.07■■□□□ 1.6
VARS-221ENST00000463184 PLIN1O60240 522 aa25.06■■□□□ 1.6
VARS-221ENST00000463184 ZBTB48P10074 688 aaPredicted RBP25.06■■□□□ 1.6
VARS-221ENST00000463184 CLRN2A0PK11 232 aa25.05■■□□□ 1.6
VARS-221ENST00000463184 ALDH1L1O75891 902 aa25.05■■□□□ 1.6
VARS-221ENST00000463184 R3HDMLQ9H3Y0 253 aa25.05■■□□□ 1.6
VARS-221ENST00000463184 SPINK5Q9NQ38 1064 aaPredicted RBP25.05■■□□□ 1.6
VARS-221ENST00000463184 PDE4DIPQ5VU43 2346 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 RBM5P52756 815 aaKnown RBP eCLIP25.04■■□□□ 1.6
VARS-221ENST00000463184 UBE4AQ14139 1066 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 IFNL1Q8IU54 200 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 WNK4Q96J92 1243 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 VEZTQ9HBM0 779 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 JAG2Q9Y219 1238 aa25.04■■□□□ 1.6
VARS-221ENST00000463184 A0A1B0GUL6 1792 aa25.03■■□□□ 1.6
VARS-221ENST00000463184 IREB2P48200 963 aaKnown RBP25.03■■□□□ 1.6
VARS-221ENST00000463184 FAM205AQ6ZU69 1335 aa25.03■■□□□ 1.6
VARS-221ENST00000463184 ECM29Q5VYK3 1845 aa25.02■■□□□ 1.6
VARS-221ENST00000463184 SSC5DA1L4H1 1573 aa25.02■■□□□ 1.6
VARS-221ENST00000463184 NBPF12Q5TAG4 269 aaPredicted RBP25.02■■□□□ 1.6
VARS-221ENST00000463184 TDRD7Q8NHU6 1098 aaKnown RBP25.02■■□□□ 1.6
VARS-221ENST00000463184 CLMNQ96JQ2 1002 aa25.02■■□□□ 1.6
VARS-221ENST00000463184 RASA3Q14644 834 aa25.01■■□□□ 1.59
VARS-221ENST00000463184 SLC4A10Q6U841 1118 aa25.01■■□□□ 1.59
VARS-221ENST00000463184 SRCIN1Q9C0H9 1055 aa25.01■■□□□ 1.59
VARS-221ENST00000463184 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.01■■□□□ 1.59
VARS-221ENST00000463184 USP2O75604 605 aaPredicted RBP25■■□□□ 1.59
VARS-221ENST00000463184 HIBADHP31937 336 aaKnown RBP25■■□□□ 1.59
VARS-221ENST00000463184 TNFAIP1Q13829 316 aa25■■□□□ 1.59
VARS-221ENST00000463184 MFSD14BQ5SR56 506 aa25■■□□□ 1.59
VARS-221ENST00000463184 SERPINA10Q9UK55 444 aa25■■□□□ 1.59
VARS-221ENST00000463184 AOX1Q06278 1338 aa24.99■■□□□ 1.59
VARS-221ENST00000463184 OTUD7BQ6GQQ9 843 aa24.99■■□□□ 1.59
VARS-221ENST00000463184 ANKRD13AQ8IZ07 590 aa24.99■■□□□ 1.59
VARS-221ENST00000463184 TTF2Q9UNY4 1162 aaKnown RBP24.99■■□□□ 1.59
VARS-221ENST00000463184 GYG1P46976 350 aa24.98■■□□□ 1.59
VARS-221ENST00000463184 SPDYE2Q495Y8 402 aa24.98■■□□□ 1.59
VARS-221ENST00000463184 FAM84BQ96KN1 310 aaPredicted RBP24.98■■□□□ 1.59
VARS-221ENST00000463184 ZNF70Q9UC06 446 aaPredicted RBP24.98■■□□□ 1.59
VARS-221ENST00000463184 IGF2BP3O00425 579 aaKnown RBP eCLIP24.97■■□□□ 1.59
VARS-221ENST00000463184 PRPF38BQ5VTL8 546 aaKnown RBP24.97■■□□□ 1.59
VARS-221ENST00000463184 SUCLG2Q96I99 432 aa24.97■■□□□ 1.59
VARS-221ENST00000463184 MROH5Q6ZUA9 1318 aa24.96■■□□□ 1.59
VARS-221ENST00000463184 KAZALD1Q96I82 304 aa24.96■■□□□ 1.59
VARS-221ENST00000463184 PUS3Q9BZE2 481 aaKnown RBP24.96■■□□□ 1.59
VARS-221ENST00000463184 RIPOR2Q9Y4F9 1068 aa24.96■■□□□ 1.59
VARS-221ENST00000463184 TRIM17Q9Y577 477 aa24.96■■□□□ 1.59
VARS-221ENST00000463184 UTYO14607 1347 aa24.95■■□□□ 1.58
VARS-221ENST00000463184 GJA5P36382 358 aa24.95■■□□□ 1.58
VARS-221ENST00000463184 DZIP1LQ8IYY4 767 aaKnown RBP24.95■■□□□ 1.58
VARS-221ENST00000463184 TDRD3Q9H7E2 651 aaKnown RBP24.95■■□□□ 1.58
VARS-221ENST00000463184 TESPA1A2RU30 521 aaPredicted RBP24.94■■□□□ 1.58
VARS-221ENST00000463184 NBPF7P0C2Y1 421 aaPredicted RBP24.94■■□□□ 1.58
VARS-221ENST00000463184 LAMB1P07942 1786 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 OTOP1Q7RTM1 612 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 FBXO33Q7Z6M2 555 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 VPS37DQ86XT2 251 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 ERO1AQ96HE7 468 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 PCDH10Q9P2E7 1040 aa24.93■■□□□ 1.58
VARS-221ENST00000463184 CRKP46108 304 aa24.92■■□□□ 1.58
VARS-221ENST00000463184 TNNI2P48788 182 aa24.92■■□□□ 1.58
VARS-221ENST00000463184 DIEXFQ68CQ4 756 aaKnown RBP24.92■■□□□ 1.58
VARS-221ENST00000463184 INTS3Q68E01 1043 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms