RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 GBA2Q9HCG7 927 aaPredicted RBP16.33■□□□□ 0.2
HDAC1-203ENST00000463172 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
HDAC1-203ENST00000463172 GYG1P46976 350 aa16.32■□□□□ 0.2
HDAC1-203ENST00000463172 HUNKP57058 714 aa16.32■□□□□ 0.2
HDAC1-203ENST00000463172 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
HDAC1-203ENST00000463172 APOBEC3FQ8IUX4 373 aaKnown RBP16.32■□□□□ 0.2
HDAC1-203ENST00000463172 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
HDAC1-203ENST00000463172 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
HDAC1-203ENST00000463172 WNT10BO00744 389 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 BCAR3O75815 825 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 CIAO1O76071 339 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 SLC5A1P13866 664 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 TRIM27P14373 513 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 MAP2K2P36507 400 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 FKBP1BP68106 108 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 CYP4F22Q6NT55 531 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
HDAC1-203ENST00000463172 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 TBC1D22AQ8WUA7 517 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-203ENST00000463172 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
HDAC1-203ENST00000463172 RFX5P48382 616 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-203ENST00000463172 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
HDAC1-203ENST00000463172 NBPF9Q3BBW0 867 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 MFSD14BQ5SR56 506 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 LPIN2Q92539 896 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 CCDC102AQ96A19 550 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 MEIS3Q99687 375 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
HDAC1-203ENST00000463172 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 GNAI2P04899 355 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 RBM5P52756 815 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 FBXO33Q7Z6M2 555 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 VGLL2Q8N8G2 317 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 MTMR14Q8NCE2 650 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 SIL1Q9H173 461 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 WBP1LQ9NX94 342 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 MYH13Q9UKX3 1938 aa16.29■□□□□ 0.2
HDAC1-203ENST00000463172 COL1A1P02452 1464 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-203ENST00000463172 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
HDAC1-203ENST00000463172 NOGQ13253 232 aa16.28■□□□□ 0.2
HDAC1-203ENST00000463172 RGMBQ6NW40 437 aa16.28■□□□□ 0.2
HDAC1-203ENST00000463172 CERS5Q8N5B7 392 aa16.28■□□□□ 0.2
HDAC1-203ENST00000463172 CLUAP1Q96AJ1 413 aa16.28■□□□□ 0.2
HDAC1-203ENST00000463172 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 MAST3O60307 1309 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
HDAC1-203ENST00000463172 ATP2B3Q16720 1220 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 CFAP100Q494V2 611 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 SERPINA10Q9UK55 444 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.2
HDAC1-203ENST00000463172 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 PAPPA2Q9BXP8 1791 aa16.27■□□□□ 0.2
HDAC1-203ENST00000463172 CA12O43570 354 aa16.26■□□□□ 0.19
HDAC1-203ENST00000463172 MS4A1P11836 297 aa16.26■□□□□ 0.19
HDAC1-203ENST00000463172 FGFR2P21802 821 aa16.26■□□□□ 0.19
HDAC1-203ENST00000463172 ZNF157P51786 506 aaPredicted RBP16.26■□□□□ 0.19
HDAC1-203ENST00000463172 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
HDAC1-203ENST00000463172 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
HDAC1-203ENST00000463172 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
HDAC1-203ENST00000463172 ZBED3Q96IU2 234 aaPredicted RBP16.26■□□□□ 0.19
HDAC1-203ENST00000463172 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 FOXN1O15353 648 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 BCAMP50895 628 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 MTX1Q13505 466 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 DLK2Q6UY11 383 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 ARMC9Q7Z3E5 817 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 SUGT1Q9Y2Z0 365 aa16.25■□□□□ 0.19
HDAC1-203ENST00000463172 AOC2O75106 756 aa16.24■□□□□ 0.19
HDAC1-203ENST00000463172 HDLBPQ00341 1268 aaKnown RBP16.24■□□□□ 0.19
HDAC1-203ENST00000463172 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-203ENST00000463172 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
HDAC1-203ENST00000463172 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
HDAC1-203ENST00000463172 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
HDAC1-203ENST00000463172 PRDM10Q9NQV6 1147 aa16.24■□□□□ 0.19
HDAC1-203ENST00000463172 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-203ENST00000463172 SEMA3EO15041 775 aa16.23■□□□□ 0.19
HDAC1-203ENST00000463172 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
HDAC1-203ENST00000463172 IFFO2Q5TF58 517 aa16.23■□□□□ 0.19
HDAC1-203ENST00000463172 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
HDAC1-203ENST00000463172 DEFB129Q9H1M3 183 aa16.23■□□□□ 0.19
HDAC1-203ENST00000463172 PA2G4Q9UQ80 394 aaKnown RBP16.23■□□□□ 0.19
HDAC1-203ENST00000463172 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-203ENST00000463172 CRKP46108 304 aa16.22■□□□□ 0.19
HDAC1-203ENST00000463172 TNNI2P48788 182 aa16.22■□□□□ 0.19
HDAC1-203ENST00000463172 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDAC1-203ENST00000463172 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
HDAC1-203ENST00000463172 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
HDAC1-203ENST00000463172 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms