RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CHL1O00533 1208 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 NEFMP07197 916 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 MAP3K11Q16584 847 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 DACT2Q5SW24 774 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 SPRYD7Q5W111 196 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 FBXO22Q8NEZ5 403 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 XDHP47989 1333 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
SMC3-202ENST00000462899 IGF2BP3O00425 579 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMC3-202ENST00000462899 ALDH1A1P00352 501 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 HOXB7P09629 217 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
SMC3-202ENST00000462899 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 ARAP2Q8WZ64 1704 aa10.09□□□□□ -0.79
SMC3-202ENST00000462899 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
SMC3-202ENST00000462899 RIPK4P57078 832 aa10.08□□□□□ -0.8
SMC3-202ENST00000462899 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
SMC3-202ENST00000462899 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
SMC3-202ENST00000462899 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
SMC3-202ENST00000462899 MYO3BQ8WXR4 1341 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
SMC3-202ENST00000462899 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
SMC3-202ENST00000462899 EN2P19622 333 aaPredicted RBP10.07□□□□□ -0.8
SMC3-202ENST00000462899 ATP2B4P23634 1241 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 MMP14P50281 582 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 LHX8Q68G74 356 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
SMC3-202ENST00000462899 DBF4Q9UBU7 674 aaPredicted RBP10.07□□□□□ -0.8
SMC3-202ENST00000462899 SASH1O94885 1247 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 PCCAP05165 728 aaPredicted RBP10.06□□□□□ -0.8
SMC3-202ENST00000462899 NF2P35240 595 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 GJA5P36382 358 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 INHBEP58166 350 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 STRIP1Q5VSL9 837 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
SMC3-202ENST00000462899 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
SMC3-202ENST00000462899 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 ZNF333Q96JL9 665 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 PNNQ9H307 717 aaKnown RBP10.06□□□□□ -0.8
SMC3-202ENST00000462899 FZD1Q9UP38 647 aa10.06□□□□□ -0.8
SMC3-202ENST00000462899 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
SMC3-202ENST00000462899 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 G3V3G9 751 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 PDE8AO60658 829 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
SMC3-202ENST00000462899 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 APOBEC3FQ8IUX4 373 aaKnown RBP10.05□□□□□ -0.8
SMC3-202ENST00000462899 CD99L2Q8TCZ2 262 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
SMC3-202ENST00000462899 IRS2Q9Y4H2 1338 aa10.05□□□□□ -0.8
SMC3-202ENST00000462899 VCANP13611 3396 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 PPP1R37O75864 691 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 CRHR2Q13324 411 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 ERO1AQ96HE7 468 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 PTPN18Q99952 460 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
SMC3-202ENST00000462899 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
SMC3-202ENST00000462899 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 HSP90B1P14625 803 aaKnown RBP10.03□□□□□ -0.8
SMC3-202ENST00000462899 CCT4P50991 539 aaKnown RBP10.03□□□□□ -0.8
SMC3-202ENST00000462899 PRKG1Q13976 671 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 OGFOD1Q8N543 542 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 PHAXQ9H814 394 aaKnown RBP10.03□□□□□ -0.8
SMC3-202ENST00000462899 BSDC1Q9NW68 430 aaPredicted RBP10.03□□□□□ -0.8
SMC3-202ENST00000462899 ZNF804BA4D1E1 1349 aa10.03□□□□□ -0.8
SMC3-202ENST00000462899 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.8
SMC3-202ENST00000462899 GTPBP6O43824 516 aaPredicted RBP10.02□□□□□ -0.81
SMC3-202ENST00000462899 KLRK1P26718 216 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 CTSWP56202 376 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 DUSP27Q5VZP5 1158 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
SMC3-202ENST00000462899 DEFB129Q9H1M3 183 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 EFCC1Q9HA90 598 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 AOX1Q06278 1338 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 MGAMO43451 1857 aa10.02□□□□□ -0.81
SMC3-202ENST00000462899 CACNA1FO60840 1977 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 ZNF853P0CG23 659 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 SP3Q02447 781 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 CERS5Q8N5B7 392 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 JARID2Q92833 1246 aaPredicted RBP10.01□□□□□ -0.81
SMC3-202ENST00000462899 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms