RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-221ENST00000462352 COL1A1P02452 1464 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-221ENST00000462352 SEMA3EO15041 775 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 ZBTB22O15209 634 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 ARID4AP29374 1257 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-221ENST00000462352 GMPSP49915 693 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-221ENST00000462352 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-221ENST00000462352 RASGRF1Q13972 1273 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 TTC39AQ5SRH9 613 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
CPNE1-221ENST00000462352 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 RPS12P25398 132 aaKnown RBP14.45□□□□□ -0.1
CPNE1-221ENST00000462352 SCNN1DP51172 638 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 CERS5Q8N5B7 392 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 AGBL3Q8NEM8 1001 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 WDR90Q96KV7 1748 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
CPNE1-221ENST00000462352 DENND2AQ9ULE3 1009 aa14.45□□□□□ -0.1
CPNE1-221ENST00000462352 MYO3BQ8WXR4 1341 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 POTECB2RU33 542 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 MCAMP43121 646 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 FKBP1AP62942 108 aaKnown RBP14.44□□□□□ -0.1
CPNE1-221ENST00000462352 SCARF1Q14162 830 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 MFSD14BQ5SR56 506 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 C16orf71Q8IYS4 520 aaPredicted RBP14.44□□□□□ -0.1
CPNE1-221ENST00000462352 DPF2Q92785 391 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 ZNF512BQ96KM6 892 aaPredicted RBP14.44□□□□□ -0.1
CPNE1-221ENST00000462352 GMLQ99445 158 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 NMRK2Q9NPI5 230 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
CPNE1-221ENST00000462352 PDS5AQ29RF7 1337 aaKnown RBP14.43□□□□□ -0.1
CPNE1-221ENST00000462352 LMOD1P29536 600 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-221ENST00000462352 NUCB1Q02818 461 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 PI16Q6UXB8 463 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 SPATA5Q8NB90 893 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-221ENST00000462352 WDR66Q8TBY9 1149 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 TBC1D22AQ8WUA7 517 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 GPBP1L1Q9HC44 474 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-221ENST00000462352 GPRC5DQ9NZD1 345 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 MYH13Q9UKX3 1938 aa14.43□□□□□ -0.1
CPNE1-221ENST00000462352 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 EPS15P42566 896 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 CHD1LQ86WJ1 897 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 KIAA0825Q8IV33 1275 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 OTUD7AQ8TE49 926 aaPredicted RBP14.42□□□□□ -0.1
CPNE1-221ENST00000462352 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 SNRKQ9NRH2 765 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 CNOT7Q9UIV1 285 aaKnown RBP14.42□□□□□ -0.1
CPNE1-221ENST00000462352 HACL1Q9UJ83 578 aa14.42□□□□□ -0.1
CPNE1-221ENST00000462352 SALL1Q9NSC2 1324 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 VEGFAP15692 232 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-221ENST00000462352 GRIK5Q16478 980 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPNE1-221ENST00000462352 ECHDC1Q9NTX5 307 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 SCN4AP35499 1836 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
CPNE1-221ENST00000462352 F8W031 263 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-221ENST00000462352 H7C1D1 291 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 ATP5JP18859 108 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 EPHX2P34913 555 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 ZAP70P43403 619 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 CENPQQ7L2Z9 268 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-221ENST00000462352 GPATCH3Q96I76 525 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-221ENST00000462352 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 NDUFB9Q9Y6M9 179 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 AKAP11Q9UKA4 1901 aa14.4□□□□□ -0.1
CPNE1-221ENST00000462352 CYP2E1P05181 493 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-221ENST00000462352 MX1P20591 662 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 PRDX5P30044 214 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 ZNF280AP59817 542 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-221ENST00000462352 TSHZ3Q63HK5 1081 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 TBC1D9Q6ZT07 1266 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 OGFOD1Q8N543 542 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 ZGPATQ8N5A5 531 aaKnown RBP14.39□□□□□ -0.11
CPNE1-221ENST00000462352 BOLA2Q9H3K6 86 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
CPNE1-221ENST00000462352 ABCF2Q9UG63 623 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 TTF2Q9UNY4 1162 aaKnown RBP14.39□□□□□ -0.11
CPNE1-221ENST00000462352 SUGT1Q9Y2Z0 365 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 TTC41PQ6P2S7 1318 aa14.39□□□□□ -0.11
CPNE1-221ENST00000462352 LDHBP07195 334 aaKnown RBP14.38□□□□□ -0.11
CPNE1-221ENST00000462352 MMP14P50281 582 aa14.38□□□□□ -0.11
CPNE1-221ENST00000462352 SAMD7Q7Z3H4 446 aa14.38□□□□□ -0.11
CPNE1-221ENST00000462352 DNAJC2Q99543 621 aaKnown RBP14.38□□□□□ -0.11
CPNE1-221ENST00000462352 HDAC9Q9UKV0 1011 aa14.38□□□□□ -0.11
CPNE1-221ENST00000462352 KIF3CO14782 793 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 EGFRP00533 1210 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-221ENST00000462352 RBM26Q5T8P6 1007 aaKnown RBP14.37□□□□□ -0.11
CPNE1-221ENST00000462352 SPTY2D1Q68D10 685 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-221ENST00000462352 USP50Q70EL3 339 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms