RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MMP14P50281 582 aa14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 CCDC102BQ68D86 513 aa14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 C16orf71Q8IYS4 520 aaPredicted RBP14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
TRAF3IP1-204ENST00000462122 H7C1D1 291 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 EPHX2P34913 555 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 PHKA1P46020 1223 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 GMLQ99445 158 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 LRRCC1Q9C099 1032 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 TAF1DQ9H5J8 278 aaPredicted RBP14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 CNOT7Q9UIV1 285 aaKnown RBP14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
TRAF3IP1-204ENST00000462122 APBB1O00213 710 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 EPS15P42566 896 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 CCDC158Q5M9N0 1113 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 AACSQ86V21 672 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 MICALL2Q8IY33 904 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 OGFOD1Q8N543 542 aa14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 EAF2Q96CJ1 260 aaPredicted RBP14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 IQSEC3Q9UPP2 1182 aaPredicted RBP14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 PDS5AQ29RF7 1337 aaKnown RBP14.32□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ZNF646O15015 1829 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 UQCRFS1P1P0C7P4 283 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 MFSD14BQ5SR56 506 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 WDR66Q8TBY9 1149 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 RWDD1Q9H446 243 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 IL1RAPL2Q9NP60 686 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 DBNLQ9UJU6 430 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 JAG2Q9Y219 1238 aa14.31□□□□□ -0.12
TRAF3IP1-204ENST00000462122 TOMM70O94826 608 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 RASGRF1Q13972 1273 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 CERS5Q8N5B7 392 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ZNF512BQ96KM6 892 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 HDAC9Q9UKV0 1011 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 SUGT1Q9Y2Z0 365 aa14.3□□□□□ -0.12
TRAF3IP1-204ENST00000462122 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 KIAA0825Q8IV33 1275 aa14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ZGPATQ8N5A5 531 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 COL1A1P02452 1464 aaPredicted RBP14.29□□□□□ -0.12
TRAF3IP1-204ENST00000462122 KIF4BQ2VIQ3 1234 aa14.28□□□□□ -0.12
TRAF3IP1-204ENST00000462122 SPATA5Q8NB90 893 aa14.28□□□□□ -0.12
TRAF3IP1-204ENST00000462122 MYOZ2Q9NPC6 264 aa14.28□□□□□ -0.12
TRAF3IP1-204ENST00000462122 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
TRAF3IP1-204ENST00000462122 MAST3O60307 1309 aa14.27□□□□□ -0.12
TRAF3IP1-204ENST00000462122 SHTN1A0MZ66 631 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 NEFLP07196 543 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 TBC1D10BQ4KMP7 808 aaPredicted RBP14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 HMG20BQ9P0W2 317 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.13
TRAF3IP1-204ENST00000462122 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 MCAMP43121 646 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 ADAMTSL1Q8N6G6 1762 aa14.26□□□□□ -0.13
TRAF3IP1-204ENST00000462122 IGSF3O75054 1194 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 POTEJP0CG39 1038 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 HIRAP54198 1017 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 HDLBPQ00341 1268 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 FSTL1Q12841 308 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SPTY2D1Q68D10 685 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 MTMR14Q8NCE2 650 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 GPATCH3Q96I76 525 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
TRAF3IP1-204ENST00000462122 EGFRP00533 1210 aa14.24□□□□□ -0.13
TRAF3IP1-204ENST00000462122 IGHDP01880 384 aa14.24□□□□□ -0.13
TRAF3IP1-204ENST00000462122 LDHBP07195 334 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP1-204ENST00000462122 SCARF1Q14162 830 aa14.24□□□□□ -0.13
TRAF3IP1-204ENST00000462122 DLGAP5Q15398 846 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms