RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCDC102AQ96A19 550 aa23.8■■□□□ 1.4
VARS-220ENST00000461874 ZNF157P51786 506 aaPredicted RBP23.79■■□□□ 1.4
VARS-220ENST00000461874 FAM84BQ96KN1 310 aaPredicted RBP23.79■■□□□ 1.4
VARS-220ENST00000461874 CA12O43570 354 aa23.78■■□□□ 1.4
VARS-220ENST00000461874 HIBADHP31937 336 aaKnown RBP23.78■■□□□ 1.4
VARS-220ENST00000461874 GYG1P46976 350 aa23.78■■□□□ 1.4
VARS-220ENST00000461874 PRAMEF18Q5VWM3 479 aa23.78■■□□□ 1.4
VARS-220ENST00000461874 MTMR14Q8NCE2 650 aa23.78■■□□□ 1.4
VARS-220ENST00000461874 TDRD7Q8NHU6 1098 aaKnown RBP23.78■■□□□ 1.4
VARS-220ENST00000461874 JAG2Q9Y219 1238 aa23.78■■□□□ 1.4
VARS-220ENST00000461874 RARSP54136 660 aaKnown RBP23.77■■□□□ 1.4
VARS-220ENST00000461874 DLGAP5Q15398 846 aa23.77■■□□□ 1.4
VARS-220ENST00000461874 METTL24Q5JXM2 366 aa23.77■■□□□ 1.4
VARS-220ENST00000461874 KLHDC4Q8TBB5 520 aa23.77■■□□□ 1.4
VARS-220ENST00000461874 API5Q9BZZ5 524 aaKnown RBP23.77■■□□□ 1.4
VARS-220ENST00000461874 FAM205AQ6ZU69 1335 aa23.77■■□□□ 1.4
VARS-220ENST00000461874 F8W031 263 aaPredicted RBP23.76■■□□□ 1.39
VARS-220ENST00000461874 APOBEC3FQ8IUX4 373 aaKnown RBP23.76■■□□□ 1.39
VARS-220ENST00000461874 VGLL2Q8N8G2 317 aa23.76■■□□□ 1.39
VARS-220ENST00000461874 CAPN15O75808 1086 aa23.75■■□□□ 1.39
VARS-220ENST00000461874 PDE8BO95263 885 aa23.75■■□□□ 1.39
VARS-220ENST00000461874 SLC10A3P09131 477 aa23.75■■□□□ 1.39
VARS-220ENST00000461874 FBXO33Q7Z6M2 555 aa23.75■■□□□ 1.39
VARS-220ENST00000461874 TSKSQ9UJT2 592 aa23.75■■□□□ 1.39
VARS-220ENST00000461874 RFX5P48382 616 aaPredicted RBP23.74■■□□□ 1.39
VARS-220ENST00000461874 KIF23Q02241 960 aaPredicted RBP23.74■■□□□ 1.39
VARS-220ENST00000461874 CFAP100Q494V2 611 aa23.74■■□□□ 1.39
VARS-220ENST00000461874 MOB2Q70IA6 237 aa23.74■■□□□ 1.39
VARS-220ENST00000461874 PCDHAC2Q9Y5I4 1007 aa23.74■■□□□ 1.39
VARS-220ENST00000461874 UBTFL1P0CB47 393 aaPredicted RBP23.73■■□□□ 1.39
VARS-220ENST00000461874 MFSD14BQ5SR56 506 aa23.73■■□□□ 1.39
VARS-220ENST00000461874 MIER1Q8N108 512 aa23.73■■□□□ 1.39
VARS-220ENST00000461874 PAPPA2Q9BXP8 1791 aa23.73■■□□□ 1.39
VARS-220ENST00000461874 SPDYE2BA6NHP3 402 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 UBE2Q2LH0YL09 131 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 SPDYE6P0CI01 402 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 NF2P35240 595 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 PTPN12Q05209 780 aaKnown RBP23.72■■□□□ 1.39
VARS-220ENST00000461874 VPS37DQ86XT2 251 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 RASAL3Q86YV0 1011 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 ARHGAP45Q92619 1136 aa23.72■■□□□ 1.39
VARS-220ENST00000461874 PRMT6Q96LA8 375 aaPredicted RBP23.72■■□□□ 1.39
VARS-220ENST00000461874 EYA2O00167 538 aa23.71■■□□□ 1.39
VARS-220ENST00000461874 CAVIN4Q5BKX8 364 aa23.71■■□□□ 1.39
VARS-220ENST00000461874 DEFB129Q9H1M3 183 aa23.71■■□□□ 1.39
VARS-220ENST00000461874 KIF16BQ96L93 1317 aa23.7■■□□□ 1.38
VARS-220ENST00000461874 FGFR2P21802 821 aa23.7■■□□□ 1.38
VARS-220ENST00000461874 TTLL12Q14166 644 aaPredicted RBP23.7■■□□□ 1.38
VARS-220ENST00000461874 DIEXFQ68CQ4 756 aaKnown RBP23.7■■□□□ 1.38
VARS-220ENST00000461874 MYO1BO43795 1136 aa23.69■■□□□ 1.38
VARS-220ENST00000461874 PUM3Q15397 648 aaKnown RBP23.69■■□□□ 1.38
VARS-220ENST00000461874 CSRNP1Q96S65 589 aa23.69■■□□□ 1.38
VARS-220ENST00000461874 TTF2Q9UNY4 1162 aaKnown RBP23.69■■□□□ 1.38
VARS-220ENST00000461874 IQSEC3Q9UPP2 1182 aaPredicted RBP23.69■■□□□ 1.38
VARS-220ENST00000461874 HDAC5Q9UQL6 1122 aa23.69■■□□□ 1.38
VARS-220ENST00000461874 AOX1Q06278 1338 aa23.68■■□□□ 1.38
VARS-220ENST00000461874 BCAMP50895 628 aa23.68■■□□□ 1.38
VARS-220ENST00000461874 RBM5P52756 815 aaKnown RBP eCLIP23.68■■□□□ 1.38
VARS-220ENST00000461874 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
VARS-220ENST00000461874 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
VARS-220ENST00000461874 SERPINA10Q9UK55 444 aa23.68■■□□□ 1.38
VARS-220ENST00000461874 LRRFIP2Q9Y608 721 aaKnown RBP23.68■■□□□ 1.38
VARS-220ENST00000461874 COL1A1P02452 1464 aaPredicted RBP23.68■■□□□ 1.38
VARS-220ENST00000461874 CLRN2A0PK11 232 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
VARS-220ENST00000461874 ARMC9Q7Z3E5 817 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 REM2Q8IYK8 340 aaPredicted RBP23.67■■□□□ 1.38
VARS-220ENST00000461874 MEIS3Q99687 375 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 SAGE1Q9NXZ1 904 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 PPP2R3BQ9Y5P8 575 aa23.67■■□□□ 1.38
VARS-220ENST00000461874 FRAT2O75474 233 aaPredicted RBP23.66■■□□□ 1.38
VARS-220ENST00000461874 CHAF1AQ13111 956 aaPredicted RBP23.66■■□□□ 1.38
VARS-220ENST00000461874 IPO8O15397 1037 aaKnown RBP23.65■■□□□ 1.38
VARS-220ENST00000461874 CIAO1O76071 339 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 PRKG1Q13976 671 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 TBC1D22AQ8WUA7 517 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 LPIN2Q92539 896 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 VEZTQ9HBM0 779 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 RNF186Q9NXI6 227 aa23.65■■□□□ 1.38
VARS-220ENST00000461874 SLC5A1P13866 664 aa23.64■■□□□ 1.37
VARS-220ENST00000461874 GRIK5Q16478 980 aa23.64■■□□□ 1.37
VARS-220ENST00000461874 LDLRAD1Q5T700 205 aa23.64■■□□□ 1.37
VARS-220ENST00000461874 SIL1Q9H173 461 aa23.64■■□□□ 1.37
VARS-220ENST00000461874 TRPA1O75762 1119 aa23.63■■□□□ 1.37
VARS-220ENST00000461874 BCAR3O75815 825 aa23.63■■□□□ 1.37
VARS-220ENST00000461874 CRKP46108 304 aa23.63■■□□□ 1.37
VARS-220ENST00000461874 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
VARS-220ENST00000461874 SPDYE2Q495Y8 402 aa23.63■■□□□ 1.37
VARS-220ENST00000461874 DZIP1LQ8IYY4 767 aaKnown RBP23.63■■□□□ 1.37
VARS-220ENST00000461874 ZNF70Q9UC06 446 aaPredicted RBP23.63■■□□□ 1.37
VARS-220ENST00000461874 ANGEL1Q9UNK9 670 aaKnown RBP23.63■■□□□ 1.37
VARS-220ENST00000461874 GNAI3P08754 354 aa23.62■■□□□ 1.37
VARS-220ENST00000461874 TRIM27P14373 513 aa23.62■■□□□ 1.37
VARS-220ENST00000461874 SUPT20HL1Q3ZLR7 823 aa23.62■■□□□ 1.37
VARS-220ENST00000461874 TDRD3Q9H7E2 651 aaKnown RBP23.62■■□□□ 1.37
VARS-220ENST00000461874 CEP126Q9P2H0 1117 aa23.62■■□□□ 1.37
VARS-220ENST00000461874 HDLBPQ00341 1268 aaKnown RBP23.61■■□□□ 1.37
VARS-220ENST00000461874 RASA3Q14644 834 aa23.61■■□□□ 1.37
VARS-220ENST00000461874 MAP3K11Q16584 847 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms