RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 TAF5LO75529 589 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 NBPF7P0C2Y1 421 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 HSPA8P11142 646 aaKnown RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 KCNJ4P48050 445 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 HUNKP57058 714 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 RABL6Q3YEC7 729 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 ANGEL2Q5VTE6 544 aaKnown RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 LDHAL6AQ6ZMR3 332 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-207ENST00000461798 OGFOD1Q8N543 542 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 C2orf69Q8N8R5 385 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 ZNF408Q9H9D4 720 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
BRCA1-207ENST00000461798 SNAP23O00161 211 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 AOC2O75106 756 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 IL1R1P14778 569 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 LBX1P52954 281 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-207ENST00000461798 FKBP1BP68106 108 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 NOGQ13253 232 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 RGMBQ6NW40 437 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-207ENST00000461798 CDCA5Q96FF9 252 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 ZBED3Q96IU2 234 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-207ENST00000461798 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-207ENST00000461798 MXD3Q9BW11 206 aa11.56□□□□□ -0.56
BRCA1-207ENST00000461798 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-207ENST00000461798 WNT10BO00744 389 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 CA12O43570 354 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
BRCA1-207ENST00000461798 GTF2IP78347 998 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 UBE4AQ14139 1066 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 NBPF9Q3BBW0 867 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 USP44Q9H0E7 712 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 THSD7BQ9C0I4 1608 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 PSME4Q14997 1843 aa11.55□□□□□ -0.56
BRCA1-207ENST00000461798 SASH1O94885 1247 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 GRM1Q13255 1194 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 ZNF804AQ7Z570 1209 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
BRCA1-207ENST00000461798 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
BRCA1-207ENST00000461798 KIAA0825Q8IV33 1275 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 CERS5Q8N5B7 392 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 ZIC5Q96T25 663 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
BRCA1-207ENST00000461798 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
BRCA1-207ENST00000461798 POLR2AP24928 1970 aaKnown RBP11.52□□□□□ -0.56
BRCA1-207ENST00000461798 PLIN1O60240 522 aa11.52□□□□□ -0.57
BRCA1-207ENST00000461798 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-207ENST00000461798 TDRD7Q8NHU6 1098 aaKnown RBP11.52□□□□□ -0.57
BRCA1-207ENST00000461798 FAM84BQ96KN1 310 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-207ENST00000461798 SLC10A3P09131 477 aa11.51□□□□□ -0.57
BRCA1-207ENST00000461798 HIBADHP31937 336 aaKnown RBP11.51□□□□□ -0.57
BRCA1-207ENST00000461798 KIF23Q02241 960 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-207ENST00000461798 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
BRCA1-207ENST00000461798 APOBEC3FQ8IUX4 373 aaKnown RBP11.51□□□□□ -0.57
BRCA1-207ENST00000461798 SCUBE2Q9NQ36 999 aa11.51□□□□□ -0.57
BRCA1-207ENST00000461798 SMC4Q9NTJ3 1288 aa11.51□□□□□ -0.57
BRCA1-207ENST00000461798 PDE8BO95263 885 aa11.5□□□□□ -0.57
BRCA1-207ENST00000461798 RFX5P48382 616 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-207ENST00000461798 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-207ENST00000461798 DLGAP5Q15398 846 aa11.5□□□□□ -0.57
BRCA1-207ENST00000461798 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
BRCA1-207ENST00000461798 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
BRCA1-207ENST00000461798 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
BRCA1-207ENST00000461798 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
BRCA1-207ENST00000461798 ZNF646O15015 1829 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-207ENST00000461798 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
BRCA1-207ENST00000461798 GYG1P46976 350 aa11.49□□□□□ -0.57
BRCA1-207ENST00000461798 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
BRCA1-207ENST00000461798 PRAMEF18Q5VWM3 479 aa11.49□□□□□ -0.57
BRCA1-207ENST00000461798 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
BRCA1-207ENST00000461798 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-207ENST00000461798 CSRNP1Q96S65 589 aa11.49□□□□□ -0.57
BRCA1-207ENST00000461798 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
BRCA1-207ENST00000461798 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
BRCA1-207ENST00000461798 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 FGFR2P21802 821 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 NF2P35240 595 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 METTL24Q5JXM2 366 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 LDLRAD1Q5T700 205 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 RASAL3Q86YV0 1011 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 HDAC5Q9UQL6 1122 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms