RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 C8AP07357 584 aa6.63□□□□□ -1.35
CLK1-206ENST00000461326 VSIG10LQ86VR7 867 aa6.63□□□□□ -1.35
CLK1-206ENST00000461326 NCAPG2Q86XI2 1143 aa6.63□□□□□ -1.35
CLK1-206ENST00000461326 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
CLK1-206ENST00000461326 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
CLK1-206ENST00000461326 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
CLK1-206ENST00000461326 FOSL1P15407 271 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
CLK1-206ENST00000461326 FKBP5Q13451 457 aaPredicted RBP6.62□□□□□ -1.35
CLK1-206ENST00000461326 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 C16orf46Q6P387 395 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 TXNDC2Q86VQ3 553 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
CLK1-206ENST00000461326 ABI2Q9NYB9 513 aaPredicted RBP6.62□□□□□ -1.35
CLK1-206ENST00000461326 PRNPP04156 253 aa6.61□□□□□ -1.35
CLK1-206ENST00000461326 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
CLK1-206ENST00000461326 RXRBP28702 533 aa6.61□□□□□ -1.35
CLK1-206ENST00000461326 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
CLK1-206ENST00000461326 CBLL1Q75N03 491 aa6.61□□□□□ -1.35
CLK1-206ENST00000461326 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
CLK1-206ENST00000461326 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
CLK1-206ENST00000461326 ARL4DP49703 201 aa6.6□□□□□ -1.35
CLK1-206ENST00000461326 MFAP1P55081 439 aaKnown RBP6.6□□□□□ -1.35
CLK1-206ENST00000461326 NLRP12P59046 1061 aa6.6□□□□□ -1.35
CLK1-206ENST00000461326 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
CLK1-206ENST00000461326 ADAMTSL4Q6UY14 1074 aa6.6□□□□□ -1.35
CLK1-206ENST00000461326 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
CLK1-206ENST00000461326 MEGF11A6BM72 1044 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 F13BP05160 661 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 OCLNQ16625 522 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 CEP120Q8N960 986 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 POP1Q99575 1024 aaKnown RBP6.59□□□□□ -1.35
CLK1-206ENST00000461326 EGFL7Q9UHF1 273 aa6.59□□□□□ -1.35
CLK1-206ENST00000461326 ITGB5P18084 799 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 ZAP70P43403 619 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 AGBL5Q8NDL9 886 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 COL26A1Q96A83 441 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 BSDC1Q9NW68 430 aaPredicted RBP6.58□□□□□ -1.36
CLK1-206ENST00000461326 SLAIN2Q9P270 581 aa6.58□□□□□ -1.36
CLK1-206ENST00000461326 PRMT3O60678 531 aa6.57□□□□□ -1.36
CLK1-206ENST00000461326 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
CLK1-206ENST00000461326 PRIMPOLQ96LW4 560 aa6.57□□□□□ -1.36
CLK1-206ENST00000461326 CYP4F12Q9HCS2 524 aa6.57□□□□□ -1.36
CLK1-206ENST00000461326 FAM95CA0A1B0GW59 222 aa6.56□□□□□ -1.36
CLK1-206ENST00000461326 CYP26A1O43174 497 aa6.56□□□□□ -1.36
CLK1-206ENST00000461326 CYP2E1P05181 493 aaPredicted RBP6.56□□□□□ -1.36
CLK1-206ENST00000461326 RANGAP1P46060 587 aaPredicted RBP6.56□□□□□ -1.36
CLK1-206ENST00000461326 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
CLK1-206ENST00000461326 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
CLK1-206ENST00000461326 FLCNQ8NFG4 579 aa6.56□□□□□ -1.36
CLK1-206ENST00000461326 GPR152Q8TDT2 470 aa6.56□□□□□ -1.36
CLK1-206ENST00000461326 SOWAHDA6NJG2 315 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 ERCC3P19447 782 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 USP11P51784 963 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 C19orf57Q0VDD7 668 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 PDE12Q6L8Q7 609 aaKnown RBP6.55□□□□□ -1.36
CLK1-206ENST00000461326 ABTB2Q8N961 1025 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
CLK1-206ENST00000461326 TNFRSF10BO14763 440 aa6.54□□□□□ -1.36
CLK1-206ENST00000461326 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
CLK1-206ENST00000461326 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
CLK1-206ENST00000461326 SMG8Q8ND04 991 aaKnown RBP6.54□□□□□ -1.36
CLK1-206ENST00000461326 RGS22Q8NE09 1264 aa6.54□□□□□ -1.36
CLK1-206ENST00000461326 SUGCTQ9HAC7 445 aa6.54□□□□□ -1.36
CLK1-206ENST00000461326 KANSL3Q9P2N6 904 aa6.54□□□□□ -1.36
CLK1-206ENST00000461326 PDE2AO00408 941 aaPredicted RBP6.53□□□□□ -1.36
CLK1-206ENST00000461326 SF3B2Q13435 895 aaKnown RBP6.53□□□□□ -1.36
CLK1-206ENST00000461326 NFXL1Q6ZNB6 911 aa6.53□□□□□ -1.36
CLK1-206ENST00000461326 ZNF438Q7Z4V0 828 aa6.53□□□□□ -1.36
CLK1-206ENST00000461326 TBC1D32Q96NH3 1257 aa6.53□□□□□ -1.36
CLK1-206ENST00000461326 TMPRSS13Q9BYE2 586 aa6.53□□□□□ -1.36
CLK1-206ENST00000461326 ELP3Q9H9T3 547 aa6.53□□□□□ -1.36
CLK1-206ENST00000461326 TIAF1O95411 115 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 SERPINB4P48594 390 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 ZAR1Q86SH2 424 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 MKNK1Q9BUB5 465 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 USP26Q9BXU7 913 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 STIM2Q9P246 746 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 SALL4Q9UJQ4 1053 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 SOX13Q9UN79 622 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 AMOTL2Q9Y2J4 779 aa6.52□□□□□ -1.37
CLK1-206ENST00000461326 BIN1O00499 593 aa6.51□□□□□ -1.37
CLK1-206ENST00000461326 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
CLK1-206ENST00000461326 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
CLK1-206ENST00000461326 DZANK1Q9NVP4 752 aa6.51□□□□□ -1.37
CLK1-206ENST00000461326 NFKBIEO00221 500 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 CES1P23141 567 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 IKBKEQ14164 716 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 NAA30Q147X3 362 aaPredicted RBP6.5□□□□□ -1.37
CLK1-206ENST00000461326 DUSP27Q5VZP5 1158 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 GLYCTKQ8IVS8 523 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
CLK1-206ENST00000461326 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
CLK1-206ENST00000461326 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms