RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	SOX13	Q9UN79	622 aa		5.01	□□□□□ -1.61
FXR1-204	ENST00000461044		A0A1W2PP55	124 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044		F8W735	103 aa	Predicted RBP	5	□□□□□ -1.61
FXR1-204	ENST00000461044	FSCN2	O14926	492 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	GPR182	O15218	404 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	DDX3Y	O15523	660 aa	Known RBP	5	□□□□□ -1.61
FXR1-204	ENST00000461044	ADAM11	O75078	769 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	ZNF16	P17020	682 aa	Predicted RBP	5	□□□□□ -1.61
FXR1-204	ENST00000461044	PTPRA	P18433	802 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	ORC1	Q13415	861 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	MAP4K3	Q8IVH8	894 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	GALNT12	Q8IXK2	581 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	KLHDC7B	Q96G42	594 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	MEGF10	Q96KG7	1140 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	BHLHE41	Q9C0J9	482 aa	Predicted RBP	5	□□□□□ -1.61
FXR1-204	ENST00000461044	SRA1	Q9HD15	236 aa	Known RBP	5	□□□□□ -1.61
FXR1-204	ENST00000461044	USP21	Q9UK80	565 aa		5	□□□□□ -1.61
FXR1-204	ENST00000461044	METTL12	A8MUP2	240 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	EDN3	P14138	238 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044		Q6ZS46	218 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	DZIP1L	Q8IYY4	767 aa	Known RBP	4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	CITED4	Q96RK1	184 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	TCF12	Q99081	682 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	RBCK1	Q9BYM8	510 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	NIF3L1	Q9GZT8	377 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044	SEMA6B	Q9H3T3	888 aa		4.99	□□□□□ -1.61
FXR1-204	ENST00000461044		H3BRJ5	948 aa		4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	SOX1	O00570	391 aa	Predicted RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	NDUFB5	O43674	189 aa		4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	DYRK3	O43781	588 aa		4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	CD68	P34810	354 aa	Predicted RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	KIAA0319	Q5VV43	1072 aa		4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	KIAA1211	Q6ZU35	1233 aa		4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	AGGF1	Q8N302	714 aa	eCLIP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	PUS7	Q96PZ0	661 aa	Known RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	MRPL18	Q9H0U6	180 aa	Known RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	THOC2	Q8NI27	1593 aa	Known RBP	4.98	□□□□□ -1.61
FXR1-204	ENST00000461044	GRIA4	P48058	902 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	PIP4K2B	P78356	416 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	PDE3B	Q13370	1112 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	DSC3	Q14574	896 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	SPRED3	Q2MJR0	410 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	TMC7	Q7Z402	723 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	CCNJL	Q8IV13	435 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	KLHL23	Q8NBE8	558 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	BSND	Q8WZ55	320 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	WNT8B	Q93098	351 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	TP53INP1	Q96A56	240 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	ALKBH8	Q96BT7	664 aa	Known RBP	4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	UBL7	Q96S82	380 aa	Predicted RBP	4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	AKTIP	Q9H8T0	292 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	SEC31B	Q9NQW1	1179 aa		4.97	□□□□□ -1.61
FXR1-204	ENST00000461044	EIF1AY	O14602	144 aa	Known RBP	4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	CPNE3	O75131	537 aa	Known RBP	4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	H2AFB1	P0C5Y9	115 aa		4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	H2AFB2	P0C5Z0	115 aa		4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	TAGLN	Q01995	201 aa	Known RBP	4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	ZNF423	Q2M1K9	1284 aa		4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	FAM177A1	Q8N128	213 aa	Predicted RBP	4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	UBASH3B	Q8TF42	649 aa		4.96	□□□□□ -1.62
FXR1-204	ENST00000461044	OSGEP	Q9NPF4	335 aa		4.96	□□□□□ -1.62
FXR1-204	ENST00000461044		A0A096LPE4	126 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044		A0A1W2PPZ6	126 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	DLGAP3	O95886	979 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	ESRRA	P11474	423 aa	Predicted RBP	4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	CCDC74A	Q96AQ1	378 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	CSRNP1	Q96S65	589 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	BCL2L13	Q9BXK5	485 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	LIN7B	Q9HAP6	207 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	NPHS2	Q9NP85	383 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	DCTN4	Q9UJW0	460 aa		4.95	□□□□□ -1.62
FXR1-204	ENST00000461044	NEFL	P07196	543 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	HSP90B1	P14625	803 aa	Known RBP	4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	ERCC3	P19447	782 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	C19orf57	Q0VDD7	668 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	IKBKE	Q14164	716 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	DUOXA2	Q1HG44	320 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	PRSS36	Q5K4E3	855 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	FAM117B	Q6P1L5	589 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	ACAD11	Q709F0	780 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	ARMC10	Q8N2F6	343 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	GLIS3	Q8NEA6	775 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	TMC1	Q8TDI8	760 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	ASAP3	Q8TDY4	903 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	EPS8L3	Q8TE67	593 aa	Known RBP	4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	GIPC2	Q8TF65	315 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	SLC7A3	Q8WY07	619 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	DMRTB1	Q96MA1	342 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	NRSN2	Q9GZP1	204 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	DNAJC25	Q9H1X3	360 aa		4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	BIN2	Q9UBW5	565 aa	Predicted RBP	4.94	□□□□□ -1.62
FXR1-204	ENST00000461044	ANKRD33B	A6NCL7	494 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	TREH	O43280	583 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	HMGB1	P09429	215 aa	Known RBP	4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	CABP4	P57796	275 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	NLRP12	P59046	1061 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	PI16	Q6UXB8	463 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	DCAF11	Q8TEB1	546 aa		4.93	□□□□□ -1.62
FXR1-204	ENST00000461044	FBXO41	Q8TF61	875 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms