RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 H3BRJ5 948 aa5.37□□□□□ -1.55
CCDC93-204ENST00000460781 RNF225M0QZC1 329 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 GNB5O14775 395 aa5.37□□□□□ -1.55
CCDC93-204ENST00000460781 TRPA1O75762 1119 aa5.37□□□□□ -1.55
CCDC93-204ENST00000460781 TRIM28Q13263 835 aaKnown RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 PEAR1Q5VY43 1037 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 ZNF385CQ66K41 422 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 NXPE3Q969Y0 559 aa5.37□□□□□ -1.55
CCDC93-204ENST00000460781 SCARF2Q96GP6 870 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 CLEC4MQ9H2X3 399 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
CCDC93-204ENST00000460781 CUX2O14529 1486 aa5.37□□□□□ -1.55
CCDC93-204ENST00000460781 WIPF1O43516 503 aa5.36□□□□□ -1.55
CCDC93-204ENST00000460781 RLBP1P12271 317 aa5.36□□□□□ -1.55
CCDC93-204ENST00000460781 PTPN12Q05209 780 aaKnown RBP5.36□□□□□ -1.55
CCDC93-204ENST00000460781 PCDH1Q08174 1060 aa5.36□□□□□ -1.55
CCDC93-204ENST00000460781 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
CCDC93-204ENST00000460781 MSL1Q68DK7 614 aa5.36□□□□□ -1.55
CCDC93-204ENST00000460781 POP1Q99575 1024 aaKnown RBP5.36□□□□□ -1.55
CCDC93-204ENST00000460781 SEC31BQ9NQW1 1179 aa5.36□□□□□ -1.55
CCDC93-204ENST00000460781 METTL12A8MUP2 240 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 AFF1P51825 1210 aaKnown RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 PIP4K2BP78356 416 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 TAGLNQ01995 201 aaKnown RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 C19orf57Q0VDD7 668 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 PWP1Q13610 501 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 TAF1CQ15572 869 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 RPS26P11Q5JNZ5 115 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 TPTE2Q6XPS3 522 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 DMRTC2Q8IXT2 367 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 WHAMMQ8TF30 809 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 WNT8BQ93098 351 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 TCF12Q99081 682 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 CBX8Q9HC52 389 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 ABCB6Q9NP58 842 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 PRDM6Q9NQX0 595 aa5.35□□□□□ -1.55
CCDC93-204ENST00000460781 SH2B1Q9NRF2 756 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-204ENST00000460781 LINC01387J3KSC0 135 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 SCAMP3O14828 347 aaKnown RBP5.34□□□□□ -1.55
CCDC93-204ENST00000460781 APBA3O96018 575 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 ZNF76P36508 570 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 GRIA4P48058 902 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 GSTM4Q03013 218 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 SPRED3Q2MJR0 410 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 TXNDC11Q6PKC3 985 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 HS2ST1Q7LGA3 356 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 DTWD1Q8N5C7 304 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 KLHL23Q8NBE8 558 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 NACC1Q96RE7 527 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 CORO1BQ9BR76 489 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 EMILIN2Q9BXX0 1053 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 ADAM19Q9H013 955 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 ZNF576Q9H609 170 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 TMEM39AQ9NV64 488 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 STARD13Q9Y3M8 1113 aa5.34□□□□□ -1.55
CCDC93-204ENST00000460781 CYP11A1P05108 521 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 ITPKAP23677 461 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 VAMP1P23763 118 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 DGKGP49619 791 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 AP3B2Q13367 1082 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 LRRC14Q15048 493 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 C1orf229Q6ZS94 237 aaPredicted RBP5.33□□□□□ -1.56
CCDC93-204ENST00000460781 C8orf86Q6ZUL3 223 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 RELL1Q8IUW5 271 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 RNF34Q969K3 372 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 ACSBG1Q96GR2 724 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 PLVAPQ9BX97 442 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 USP26Q9BXU7 913 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 OSBPL7Q9BZF2 842 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 OSGEPQ9NPF4 335 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 SOX13Q9UN79 622 aa5.33□□□□□ -1.56
CCDC93-204ENST00000460781 FSCN2O14926 492 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 FBXO24O75426 580 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 EPHA1P21709 976 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 ST13P50502 369 aaKnown RBP5.32□□□□□ -1.56
CCDC93-204ENST00000460781 ZNF157P51786 506 aaPredicted RBP5.32□□□□□ -1.56
CCDC93-204ENST00000460781 PDE3AQ14432 1141 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 C20orf204Q6ZNR8 217 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 ZNF428Q96B54 188 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 GGT7Q9UJ14 662 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 USP21Q9UK80 565 aa5.32□□□□□ -1.56
CCDC93-204ENST00000460781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.32□□□□□ -1.56
CCDC93-204ENST00000460781 NFKBIEO00221 500 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 TCF3P15923 654 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 MRPL58Q14197 206 aaKnown RBP5.31□□□□□ -1.56
CCDC93-204ENST00000460781 SUZ12Q15022 739 aaKnown RBP5.31□□□□□ -1.56
CCDC93-204ENST00000460781 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 MDFIQ99750 246 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 CARD10Q9BWT7 1032 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 SOX17Q9H6I2 414 aaPredicted RBP5.31□□□□□ -1.56
CCDC93-204ENST00000460781 CCSER2Q9H7U1 834 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 PICK1Q9NRD5 415 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 METTL5Q9NRN9 209 aaKnown RBP5.31□□□□□ -1.56
CCDC93-204ENST00000460781 RAD18Q9NS91 495 aa5.31□□□□□ -1.56
CCDC93-204ENST00000460781 B3GALT4O96024 378 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 ESRRAP11474 423 aaPredicted RBP5.3□□□□□ -1.56
CCDC93-204ENST00000460781 NID1P14543 1247 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms