RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
SCAMP4-206ENST00000460767 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-206ENST00000460767 HTTP42858 3142 aa17.36■□□□□ 0.37
SCAMP4-206ENST00000460767 IGF2BP3O00425 579 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 CASP7P55210 303 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 WNK4Q96J92 1243 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 MXD3Q9BW11 206 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
SCAMP4-206ENST00000460767 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-206ENST00000460767 OTOFQ9HC10 1997 aa17.33■□□□□ 0.37
SCAMP4-206ENST00000460767 ZNF804BA4D1E1 1349 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 TESPA1A2RU30 521 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 WTIPA6NIX2 430 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 H7C1W4 665 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 DEFB129Q9H1M3 183 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
SCAMP4-206ENST00000460767 PPP1R12BO60237 982 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-206ENST00000460767 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCAMP4-206ENST00000460767 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
SCAMP4-206ENST00000460767 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
SCAMP4-206ENST00000460767 GREM2Q9H772 168 aa17.32■□□□□ 0.36
SCAMP4-206ENST00000460767 F6X3S4 739 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 PRKG1Q13976 671 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 GCKRQ14397 625 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 KIAA0825Q8IV33 1275 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
SCAMP4-206ENST00000460767 PTPRCP08575 1304 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 IRS2Q9Y4H2 1338 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 CRHR2Q13324 411 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 CD99L2Q8TCZ2 262 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 ZNF333Q96JL9 665 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 EFCC1Q9HA90 598 aa17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 KIAA0100Q14667 2235 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-206ENST00000460767 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 SP3Q02447 781 aa17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 SUPT20HL1Q3ZLR7 823 aa17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
SCAMP4-206ENST00000460767 MKI67P46013 3256 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 ARAP2Q8WZ64 1704 aa17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 EN2P19622 333 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 GTF2IP78347 998 aa17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 FZD1Q9UP38 647 aa17.28■□□□□ 0.36
SCAMP4-206ENST00000460767 UTYO14607 1347 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 MYO1BO43795 1136 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 KLRK1P26718 216 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 GJA5P36382 358 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 PTPN18Q99952 460 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 CD209Q9NNX6 404 aa17.27■□□□□ 0.36
SCAMP4-206ENST00000460767 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 ARHGEF6Q15052 776 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 TMEM106CQ9BVX2 250 aa17.26■□□□□ 0.35
SCAMP4-206ENST00000460767 USP2O75604 605 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-206ENST00000460767 CSF1RP07333 972 aa17.25■□□□□ 0.35
SCAMP4-206ENST00000460767 CAP1Q01518 475 aa17.25■□□□□ 0.35
SCAMP4-206ENST00000460767 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
SCAMP4-206ENST00000460767 COLQQ9Y215 455 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-206ENST00000460767 IL1R1P14778 569 aa17.24■□□□□ 0.35
SCAMP4-206ENST00000460767 ITGA6P23229 1130 aa17.24■□□□□ 0.35
SCAMP4-206ENST00000460767 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
SCAMP4-206ENST00000460767 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
SCAMP4-206ENST00000460767 CHRNDQ07001 517 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 CFAP100Q494V2 611 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 NBPF12Q5TAG4 269 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 ARHGAP45Q92619 1136 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
SCAMP4-206ENST00000460767 BRCA2P51587 3418 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 GRM8O00222 908 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 FOXO4P98177 505 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 SLC9C1Q4G0N8 1177 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 PRMT6Q96LA8 375 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-206ENST00000460767 RASA3Q14644 834 aa17.21■□□□□ 0.35
SCAMP4-206ENST00000460767 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms