RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ADAMTSL1Q8N6G6 1762 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 PSMD14O00487 310 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 ZBTB22O15209 634 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 VIL1P09327 827 aaKnown RBP27.63■■■□□ 2.01
C9orf3-209ENST00000460573 BCAMP50895 628 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 STRIP1Q5VSL9 837 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 XAGE2Q96GT9 111 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 KCNQ5Q9NR82 932 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 ADARB2Q9NS39 739 aaKnown RBP27.63■■■□□ 2.01
C9orf3-209ENST00000460573 GPRC5DQ9NZD1 345 aa27.63■■■□□ 2.01
C9orf3-209ENST00000460573 GMPSP49915 693 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-209ENST00000460573 CLASRPQ8N2M8 674 aaKnown RBP27.62■■■□□ 2.01
C9orf3-209ENST00000460573 ARAP2Q8WZ64 1704 aa27.61■■■□□ 2.01
C9orf3-209ENST00000460573 NEFLP07196 543 aa27.61■■■□□ 2.01
C9orf3-209ENST00000460573 TTLL5Q6EMB2 1281 aa27.61■■■□□ 2.01
C9orf3-209ENST00000460573 GCC1Q96CN9 775 aa27.61■■■□□ 2.01
C9orf3-209ENST00000460573 LRRCC1Q9C099 1032 aa27.61■■■□□ 2.01
C9orf3-209ENST00000460573 APBB1O00213 710 aa27.6■■■□□ 2.01
C9orf3-209ENST00000460573 FRAT2O75474 233 aaPredicted RBP27.6■■■□□ 2.01
C9orf3-209ENST00000460573 ITGBL1O95965 494 aaPredicted RBP27.6■■■□□ 2.01
C9orf3-209ENST00000460573 RPS12P25398 132 aaKnown RBP27.6■■■□□ 2.01
C9orf3-209ENST00000460573 GORABQ5T7V8 394 aa27.6■■■□□ 2.01
C9orf3-209ENST00000460573 ABT1Q9ULW3 272 aaKnown RBP27.6■■■□□ 2.01
C9orf3-209ENST00000460573 SEMA3EO15041 775 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 ADORA1P30542 326 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 GTF2IP78347 998 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 CCDC102BQ68D86 513 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 AGBL3Q8NEM8 1001 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 EAF2Q96CJ1 260 aaPredicted RBP27.59■■■□□ 2.01
C9orf3-209ENST00000460573 FAM205AQ6ZU69 1335 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 MYO3BQ8WXR4 1341 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 SCN9AQ15858 1988 aa27.59■■■□□ 2.01
C9orf3-209ENST00000460573 PSME4Q14997 1843 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 H7C1D1 291 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 DACT2Q5SW24 774 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 IFFO2Q5TF58 517 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 RSBN1LQ6PCB5 846 aaPredicted RBP27.58■■■□□ 2.01
C9orf3-209ENST00000460573 DPF2Q92785 391 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 IL1RAPL2Q9NP60 686 aa27.58■■■□□ 2.01
C9orf3-209ENST00000460573 HSPA1AP0DMV8 641 aaKnown RBP27.57■■■□□ 2
C9orf3-209ENST00000460573 HSPA1BP0DMV9 641 aaKnown RBP27.57■■■□□ 2
C9orf3-209ENST00000460573 FKBP1AP62942 108 aaKnown RBP27.57■■■□□ 2
C9orf3-209ENST00000460573 CCDC158Q5M9N0 1113 aa27.57■■■□□ 2
C9orf3-209ENST00000460573 AACSQ86V21 672 aa27.57■■■□□ 2
C9orf3-209ENST00000460573 FBXW7Q969H0 707 aa27.57■■■□□ 2
C9orf3-209ENST00000460573 PHKA1P46020 1223 aa27.56■■■□□ 2
C9orf3-209ENST00000460573 PAXIP1Q6ZW49 1069 aaPredicted RBP27.56■■■□□ 2
C9orf3-209ENST00000460573 DENND2AQ9ULE3 1009 aa27.56■■■□□ 2
C9orf3-209ENST00000460573 CNTNAP1P78357 1384 aa27.56■■■□□ 2
C9orf3-209ENST00000460573 UQCRFS1P1P0C7P4 283 aa27.55■■■□□ 2
C9orf3-209ENST00000460573 MMP14P50281 582 aa27.55■■■□□ 2
C9orf3-209ENST00000460573 DBNDD2Q9BQY9 259 aa27.55■■■□□ 2
C9orf3-209ENST00000460573 CCDC8Q9H0W5 538 aaPredicted RBP27.55■■■□□ 2
C9orf3-209ENST00000460573 CNOT7Q9UIV1 285 aaKnown RBP27.55■■■□□ 2
C9orf3-209ENST00000460573 IFIT2P09913 472 aaKnown RBP27.54■■■□□ 2
C9orf3-209ENST00000460573 TBC1D22AQ8WUA7 517 aa27.54■■■□□ 2
C9orf3-209ENST00000460573 IQSEC3Q9UPP2 1182 aaPredicted RBP27.54■■■□□ 2
C9orf3-209ENST00000460573 ZBTB12Q9Y330 459 aaPredicted RBP27.54■■■□□ 2
C9orf3-209ENST00000460573 PDS5AQ29RF7 1337 aaKnown RBP27.53■■■□□ 2
C9orf3-209ENST00000460573 ARID4AP29374 1257 aaPredicted RBP27.53■■■□□ 2
C9orf3-209ENST00000460573 ZNF512BQ96KM6 892 aaPredicted RBP27.53■■■□□ 2
C9orf3-209ENST00000460573 GMLQ99445 158 aa27.53■■■□□ 2
C9orf3-209ENST00000460573 ZBTB47Q9UFB7 747 aaPredicted RBP27.53■■■□□ 2
C9orf3-209ENST00000460573 DBNLQ9UJU6 430 aaKnown RBP27.53■■■□□ 2
C9orf3-209ENST00000460573 TRPM7Q96QT4 1865 aa27.53■■■□□ 2
C9orf3-209ENST00000460573 IGHDP01880 384 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 DEFB115Q30KQ5 88 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 TTC39AQ5SRH9 613 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 SMC5Q8IY18 1101 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 MICALL2Q8IY33 904 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 WDR66Q8TBY9 1149 aa27.52■■■□□ 2
C9orf3-209ENST00000460573 AIDAQ96BJ3 306 aa27.51■■□□□ 1.99
C9orf3-209ENST00000460573 CHAF1AQ13111 956 aaPredicted RBP27.5■■□□□ 1.99
C9orf3-209ENST00000460573 MFSD14BQ5SR56 506 aa27.5■■□□□ 1.99
C9orf3-209ENST00000460573 TLR7Q9NYK1 1049 aaKnown RBP27.5■■□□□ 1.99
C9orf3-209ENST00000460573 ZNF646O15015 1829 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-209ENST00000460573 SMARCA5O60264 1052 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-209ENST00000460573 RASGRF1Q13972 1273 aa27.49■■□□□ 1.99
C9orf3-209ENST00000460573 SUGT1Q9Y2Z0 365 aa27.49■■□□□ 1.99
C9orf3-209ENST00000460573 TRAF5O00463 557 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 USP17L8P0C7I0 530 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 VEGFBP49765 207 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 GRM1Q13255 1194 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 ANKRD45Q5TZF3 282 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 OGFOD1Q8N543 542 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 ZGPATQ8N5A5 531 aaKnown RBP27.48■■□□□ 1.99
C9orf3-209ENST00000460573 MXD3Q9BW11 206 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 ZNF408Q9H9D4 720 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 JAG2Q9Y219 1238 aa27.48■■□□□ 1.99
C9orf3-209ENST00000460573 SALL1Q9NSC2 1324 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 ERICH6BQ5W0A0 696 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 CERS5Q8N5B7 392 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 SPATA5Q8NB90 893 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 TRPM4Q8TD43 1214 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 ZC3H15Q8WU90 426 aaKnown RBP27.47■■□□□ 1.99
C9orf3-209ENST00000460573 HDAC9Q9UKV0 1011 aa27.47■■□□□ 1.99
C9orf3-209ENST00000460573 MYH13Q9UKX3 1938 aa27.46■■□□□ 1.99
C9orf3-209ENST00000460573 ZNF280AP59817 542 aaPredicted RBP27.46■■□□□ 1.99
C9orf3-209ENST00000460573 RBM26Q5T8P6 1007 aaKnown RBP27.46■■□□□ 1.99
C9orf3-209ENST00000460573 HMG20BQ9P0W2 317 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms