RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 C7P10643 843 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 MX1P20591 662 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 AOC3Q16853 763 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 CCDC102BQ68D86 513 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 CD209Q9NNX6 404 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 DLEC1Q9Y238 1755 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 PDS5AQ29RF7 1337 aaKnown RBP13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 ZNF609O15014 1411 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 IL1R1P14778 569 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 GYG1P46976 350 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 SPTY2D1Q68D10 685 aaPredicted RBP13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
SMNDC1-203ENST00000460483 AOX1Q06278 1338 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 ECE2O60344 883 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 ATP5JP18859 108 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 BCAMP50895 628 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 STRIP1Q5VSL9 837 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 TDRD7Q8NHU6 1098 aaKnown RBP13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 SUGT1Q9Y2Z0 365 aa13.42□□□□□ -0.26
SMNDC1-203ENST00000460483 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 FKBP1AP62942 108 aaKnown RBP13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 TTLL5Q6EMB2 1281 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
SMNDC1-203ENST00000460483 MAST3O60307 1309 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 SNED1Q8TER0 1413 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 KIAA1551Q9HCM1 1747 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 RASSF7Q02833 373 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 HDAC9Q9UKV0 1011 aa13.4□□□□□ -0.26
SMNDC1-203ENST00000460483 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 FZD9O00144 591 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 SNAP23O00161 211 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 ADORA1P30542 326 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 PHKA1P46020 1223 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 PDE1AP54750 535 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 GPC2Q8N158 579 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
SMNDC1-203ENST00000460483 MAP3K13O43283 966 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 EIF5BO60841 1220 aaKnown RBP13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 GTF2IP78347 998 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 GSTO1P78417 241 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 TXNRD3Q86VQ6 643 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 CNTROBQ8N137 903 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
SMNDC1-203ENST00000460483 KLRK1P26718 216 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 CHAF1AQ13111 956 aaPredicted RBP13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 RASGRF1Q13972 1273 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 MFSD14BQ5SR56 506 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 CERS3Q8IU89 383 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 HAUS7Q99871 368 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 IRS2Q9Y4H2 1338 aa13.37□□□□□ -0.27
SMNDC1-203ENST00000460483 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 HIP1O00291 1037 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 LDHCP07864 332 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 DPF2Q92785 391 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 EVI5LQ96CN4 794 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
SMNDC1-203ENST00000460483 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms