RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 TDRD7Q8NHU6 1098 aaKnown RBP20.48■□□□□ 0.87
SMARCD3-204ENST00000460431 TLL2Q9Y6L7 1015 aa20.48■□□□□ 0.87
SMARCD3-204ENST00000460431 TRPM7Q96QT4 1865 aa20.47■□□□□ 0.87
SMARCD3-204ENST00000460431 MMP14P50281 582 aa20.47■□□□□ 0.87
SMARCD3-204ENST00000460431 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
SMARCD3-204ENST00000460431 CEP126Q9P2H0 1117 aa20.47■□□□□ 0.87
SMARCD3-204ENST00000460431 PNMA6EA0A0J9YXQ4 647 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 CELF2O95319 508 aaKnown RBP20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 CDC37L1Q7L3B6 337 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 LPIN2Q92539 896 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 CAPNS2Q96L46 248 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 FAM205AQ6ZU69 1335 aa20.46■□□□□ 0.87
SMARCD3-204ENST00000460431 FKBP1AP62942 108 aaKnown RBP20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 CAVIN4Q5BKX8 364 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 SAPCD2Q86UD0 394 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 OGFOD1Q8N543 542 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 CERS5Q8N5B7 392 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
SMARCD3-204ENST00000460431 SLC5A1P13866 664 aa20.44■□□□□ 0.86
SMARCD3-204ENST00000460431 CTCFP49711 727 aaPredicted RBP20.44■□□□□ 0.86
SMARCD3-204ENST00000460431 CYP4F22Q6NT55 531 aa20.44■□□□□ 0.86
SMARCD3-204ENST00000460431 VPS37DQ86XT2 251 aa20.44■□□□□ 0.86
SMARCD3-204ENST00000460431 AIDAQ96BJ3 306 aa20.44■□□□□ 0.86
SMARCD3-204ENST00000460431 ECE1P42892 770 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 BCAMP50895 628 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 MAP2K1Q02750 393 aaPredicted RBP20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 POLA2Q14181 598 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
SMARCD3-204ENST00000460431 SCARF1Q14162 830 aa20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 MVPQ14764 893 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 PAXIP1Q6ZW49 1069 aaPredicted RBP20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 HDAC9Q9UKV0 1011 aa20.42■□□□□ 0.86
SMARCD3-204ENST00000460431 LBX1P52954 281 aa20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 DCPSQ96C86 337 aaKnown RBP20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 JAG2Q9Y219 1238 aa20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 COG6Q9Y2V7 657 aa20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 MYH13Q9UKX3 1938 aa20.41■□□□□ 0.86
SMARCD3-204ENST00000460431 ASTN2O75129 1339 aaPredicted RBP20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 CAPN15O75808 1086 aa20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 GRM1Q13255 1194 aa20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 ZNF408Q9H9D4 720 aa20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 DDX19BQ9UMR2 479 aa20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 IQSEC3Q9UPP2 1182 aaPredicted RBP20.4■□□□□ 0.86
SMARCD3-204ENST00000460431 WNT10BO00744 389 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 HSPA8P11142 646 aaKnown RBP20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 TFCP2Q12800 502 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 NBPF9Q3BBW0 867 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 MFSD14BQ5SR56 506 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 KRT26Q7Z3Y9 468 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 ZBED3Q96IU2 234 aaPredicted RBP20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 GGA3Q9NZ52 723 aa20.39■□□□□ 0.85
SMARCD3-204ENST00000460431 THSD7BQ9C0I4 1608 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 AOC2O75106 756 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 MAP2K2P36507 400 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 ANGEL2Q5VTE6 544 aaKnown RBP20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 MTMR14Q8NCE2 650 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 AKAP2Q9Y2D5 859 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
SMARCD3-204ENST00000460431 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 F8W031 263 aaPredicted RBP20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 TIMM10P62072 90 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 C20orf194Q5TEA3 1177 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 CEP85Q6P2H3 762 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 SULF1Q8IWU6 871 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 TBC1D22AQ8WUA7 517 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 ZBTB40Q9NUA8 1239 aa20.37■□□□□ 0.85
SMARCD3-204ENST00000460431 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 ZBTB22O15209 634 aa20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 CHMP4BQ9H444 224 aaKnown RBP20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 ECM29Q5VYK3 1845 aa20.36■□□□□ 0.85
SMARCD3-204ENST00000460431 A0A1B0GUL7 405 aa20.35■□□□□ 0.85
SMARCD3-204ENST00000460431 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
SMARCD3-204ENST00000460431 ADORA1P30542 326 aa20.35■□□□□ 0.85
SMARCD3-204ENST00000460431 DLGAP5Q15398 846 aa20.35■□□□□ 0.85
SMARCD3-204ENST00000460431 GNL3LQ9NVN8 582 aaKnown RBP20.35■□□□□ 0.85
SMARCD3-204ENST00000460431 PHKA1P46020 1223 aa20.34■□□□□ 0.85
SMARCD3-204ENST00000460431 CFAP100Q494V2 611 aa20.34■□□□□ 0.85
SMARCD3-204ENST00000460431 XAGE2Q96GT9 111 aa20.34■□□□□ 0.85
SMARCD3-204ENST00000460431 TTF2Q9UNY4 1162 aaKnown RBP20.34■□□□□ 0.85
SMARCD3-204ENST00000460431 HUNKP57058 714 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 GRIK5Q16478 980 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 CCDC102BQ68D86 513 aa20.33■□□□□ 0.85
SMARCD3-204ENST00000460431 RPAP2Q8IXW5 612 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms