RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 IL1R1P14778 569 aa12.57□□□□□ -0.4
GARNL3-211ENST00000460176 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
GARNL3-211ENST00000460176 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
GARNL3-211ENST00000460176 TDRD7Q8NHU6 1098 aaKnown RBP12.57□□□□□ -0.4
GARNL3-211ENST00000460176 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-211ENST00000460176 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
GARNL3-211ENST00000460176 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
GARNL3-211ENST00000460176 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
GARNL3-211ENST00000460176 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
GARNL3-211ENST00000460176 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
GARNL3-211ENST00000460176 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
GARNL3-211ENST00000460176 G3V3G9 751 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 FZD9O00144 591 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 PDE4AP27815 886 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-211ENST00000460176 SCARF1Q14162 830 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 PODNQ7Z5L7 613 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-211ENST00000460176 KCNQ5Q9NR82 932 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-211ENST00000460176 DOCK2Q92608 1830 aa12.55□□□□□ -0.4
GARNL3-211ENST00000460176 SEMA3EO15041 775 aa12.54□□□□□ -0.4
GARNL3-211ENST00000460176 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
GARNL3-211ENST00000460176 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
GARNL3-211ENST00000460176 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
GARNL3-211ENST00000460176 MYO5AQ9Y4I1 1855 aaKnown RBP12.54□□□□□ -0.4
GARNL3-211ENST00000460176 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
GARNL3-211ENST00000460176 ATP5JP18859 108 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 MX1P20591 662 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 MCAMP43121 646 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 RASGRF1Q13972 1273 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
GARNL3-211ENST00000460176 ECHDC1Q9NTX5 307 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
GARNL3-211ENST00000460176 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 PDS5AQ29RF7 1337 aaKnown RBP12.53□□□□□ -0.4
GARNL3-211ENST00000460176 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
GARNL3-211ENST00000460176 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
GARNL3-211ENST00000460176 UTRNP46939 3433 aa12.52□□□□□ -0.4
GARNL3-211ENST00000460176 PDE1AP54750 535 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 GTF2IP78347 998 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 CXCL9Q07325 125 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 DACT2Q5SW24 774 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 PI4K2BQ8TCG2 481 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
GARNL3-211ENST00000460176 ADAMTSL1Q8N6G6 1762 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 MYH7P12883 1935 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-211ENST00000460176 RAD17O75943 681 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 EIF6P56537 245 aaKnown RBP12.51□□□□□ -0.41
GARNL3-211ENST00000460176 CHAF1AQ13111 956 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-211ENST00000460176 STRIP1Q5VSL9 837 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 AOX1Q06278 1338 aa12.51□□□□□ -0.41
GARNL3-211ENST00000460176 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 PSMD14O00487 310 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
GARNL3-211ENST00000460176 ZAP70P43403 619 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 CIAPIN1Q6FI81 312 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 HAUS7Q99871 368 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 SALL1Q9NSC2 1324 aa12.5□□□□□ -0.41
GARNL3-211ENST00000460176 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
GARNL3-211ENST00000460176 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
GARNL3-211ENST00000460176 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-211ENST00000460176 FKBP1AP62942 108 aaKnown RBP12.49□□□□□ -0.41
GARNL3-211ENST00000460176 TNIP1Q15025 636 aa12.49□□□□□ -0.41
GARNL3-211ENST00000460176 RSBN1LQ6PCB5 846 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-211ENST00000460176 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
GARNL3-211ENST00000460176 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-211ENST00000460176 ERC2O15083 957 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 GRIK5Q16478 980 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 GPC2Q8N158 579 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 TBC1D22AQ8WUA7 517 aa12.48□□□□□ -0.41
GARNL3-211ENST00000460176 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms