RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 CLRN2A0PK11 232 aa27.62■■■□□ 2.01
PDE6B-203ENST00000460119 MMP14P50281 582 aa27.62■■■□□ 2.01
PDE6B-203ENST00000460119 CFAP100Q494V2 611 aa27.61■■■□□ 2.01
PDE6B-203ENST00000460119 C15orf52Q6ZUT6 534 aaKnown RBP27.61■■■□□ 2.01
PDE6B-203ENST00000460119 WDR63Q8IWG1 891 aa27.61■■■□□ 2.01
PDE6B-203ENST00000460119 SLC10A4Q96EP9 437 aa27.61■■■□□ 2.01
PDE6B-203ENST00000460119 CLMNQ96JQ2 1002 aa27.61■■■□□ 2.01
PDE6B-203ENST00000460119 PRMT6Q96LA8 375 aaPredicted RBP27.61■■■□□ 2.01
PDE6B-203ENST00000460119 SPEF2Q9C093 1822 aa27.6■■■□□ 2.01
PDE6B-203ENST00000460119 IL1R1P14778 569 aa27.59■■■□□ 2.01
PDE6B-203ENST00000460119 SREBF2Q12772 1141 aa27.59■■■□□ 2.01
PDE6B-203ENST00000460119 PKN2Q16513 984 aaKnown RBP27.58■■■□□ 2.01
PDE6B-203ENST00000460119 NCBP3Q53F19 620 aaKnown RBP27.58■■■□□ 2.01
PDE6B-203ENST00000460119 MTMR14Q8NCE2 650 aa27.58■■■□□ 2.01
PDE6B-203ENST00000460119 AKAP11Q9UKA4 1901 aa27.57■■■□□ 2
PDE6B-203ENST00000460119 FKTNO75072 461 aa27.57■■■□□ 2
PDE6B-203ENST00000460119 NBPF12Q5TAG4 269 aaPredicted RBP27.57■■■□□ 2
PDE6B-203ENST00000460119 LDHAL6AQ6ZMR3 332 aa27.57■■■□□ 2
PDE6B-203ENST00000460119 ZNF804AQ7Z570 1209 aa27.57■■■□□ 2
PDE6B-203ENST00000460119 VEZTQ9HBM0 779 aa27.57■■■□□ 2
PDE6B-203ENST00000460119 SPDYE2BA6NHP3 402 aa27.56■■■□□ 2
PDE6B-203ENST00000460119 SPDYE6P0CI01 402 aa27.56■■■□□ 2
PDE6B-203ENST00000460119 CCDC57Q2TAC2 916 aa27.56■■■□□ 2
PDE6B-203ENST00000460119 CNNM1Q9NRU3 951 aa27.56■■■□□ 2
PDE6B-203ENST00000460119 RBM5P52756 815 aaKnown RBP eCLIP27.55■■■□□ 2
PDE6B-203ENST00000460119 TAF7LQ5H9L4 462 aa27.55■■■□□ 2
PDE6B-203ENST00000460119 ZNF646O15015 1829 aaPredicted RBP27.55■■■□□ 2
PDE6B-203ENST00000460119 GRM8O00222 908 aa27.54■■■□□ 2
PDE6B-203ENST00000460119 PUS3Q9BZE2 481 aaKnown RBP27.54■■■□□ 2
PDE6B-203ENST00000460119 MAP3K11Q16584 847 aa27.53■■■□□ 2
PDE6B-203ENST00000460119 NOM1Q5C9Z4 860 aaKnown RBP27.53■■■□□ 2
PDE6B-203ENST00000460119 SLC4A10Q6U841 1118 aa27.53■■■□□ 2
PDE6B-203ENST00000460119 IFNL1Q8IU54 200 aa27.53■■■□□ 2
PDE6B-203ENST00000460119 WNK4Q96J92 1243 aa27.53■■■□□ 2
PDE6B-203ENST00000460119 C9orf78Q9NZ63 289 aaPredicted RBP27.53■■■□□ 2
PDE6B-203ENST00000460119 SSC5DA1L4H1 1573 aa27.52■■■□□ 2
PDE6B-203ENST00000460119 IGF2BP3O00425 579 aaKnown RBP eCLIP27.52■■■□□ 2
PDE6B-203ENST00000460119 PPP1R12BO60237 982 aaPredicted RBP27.52■■■□□ 2
PDE6B-203ENST00000460119 USP2O75604 605 aaPredicted RBP27.52■■■□□ 2
PDE6B-203ENST00000460119 GYG1P46976 350 aa27.52■■■□□ 2
PDE6B-203ENST00000460119 RASA3Q14644 834 aa27.52■■■□□ 2
PDE6B-203ENST00000460119 FBXO46Q6PJ61 603 aaPredicted RBP27.52■■■□□ 2
PDE6B-203ENST00000460119 CFHR5Q9BXR6 569 aa27.52■■■□□ 2
PDE6B-203ENST00000460119 MYH3P11055 1940 aa27.51■■■□□ 2
PDE6B-203ENST00000460119 MANSC4A6NHS7 340 aaPredicted RBP27.51■■□□□ 1.99
PDE6B-203ENST00000460119 MYO1BO43795 1136 aa27.51■■□□□ 1.99
PDE6B-203ENST00000460119 GJA5P36382 358 aa27.51■■□□□ 1.99
PDE6B-203ENST00000460119 FKBP1AP62942 108 aaKnown RBP27.51■■□□□ 1.99
PDE6B-203ENST00000460119 SUPT20HL1Q3ZLR7 823 aa27.51■■□□□ 1.99
PDE6B-203ENST00000460119 KAZALD1Q96I82 304 aa27.5■■□□□ 1.99
PDE6B-203ENST00000460119 SUCLG2Q96I99 432 aa27.5■■□□□ 1.99
PDE6B-203ENST00000460119 PPP2R3BQ9Y5P8 575 aa27.5■■□□□ 1.99
PDE6B-203ENST00000460119 TDRD7Q8NHU6 1098 aaKnown RBP27.49■■□□□ 1.99
PDE6B-203ENST00000460119 FAM84BQ96KN1 310 aaPredicted RBP27.49■■□□□ 1.99
PDE6B-203ENST00000460119 TDRD3Q9H7E2 651 aaKnown RBP27.49■■□□□ 1.99
PDE6B-203ENST00000460119 ALDH1A1P00352 501 aa27.48■■□□□ 1.99
PDE6B-203ENST00000460119 INHBEP58166 350 aa27.48■■□□□ 1.99
PDE6B-203ENST00000460119 GRIK5Q16478 980 aa27.48■■□□□ 1.99
PDE6B-203ENST00000460119 CDAN1Q8IWY9 1227 aa27.48■■□□□ 1.99
PDE6B-203ENST00000460119 ZNF70Q9UC06 446 aaPredicted RBP27.48■■□□□ 1.99
PDE6B-203ENST00000460119 TTF2Q9UNY4 1162 aaKnown RBP27.48■■□□□ 1.99
PDE6B-203ENST00000460119 FAM205AQ6ZU69 1335 aa27.47■■□□□ 1.99
PDE6B-203ENST00000460119 ANP32CO43423 234 aa27.47■■□□□ 1.99
PDE6B-203ENST00000460119 HIBADHP31937 336 aaKnown RBP27.47■■□□□ 1.99
PDE6B-203ENST00000460119 MFSD14BQ5SR56 506 aa27.47■■□□□ 1.99
PDE6B-203ENST00000460119 TRIM17Q9Y577 477 aa27.47■■□□□ 1.99
PDE6B-203ENST00000460119 ALDH1L1O75891 902 aa27.46■■□□□ 1.99
PDE6B-203ENST00000460119 NBPF7P0C2Y1 421 aaPredicted RBP27.46■■□□□ 1.99
PDE6B-203ENST00000460119 ZBTB48P10074 688 aaPredicted RBP27.46■■□□□ 1.99
PDE6B-203ENST00000460119 FAM9BQ8IZU0 186 aa27.46■■□□□ 1.99
PDE6B-203ENST00000460119 SRCIN1Q9C0H9 1055 aa27.46■■□□□ 1.99
PDE6B-203ENST00000460119 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
PDE6B-203ENST00000460119 COL1A1P02452 1464 aaPredicted RBP27.45■■□□□ 1.99
PDE6B-203ENST00000460119 IREB2P48200 963 aaKnown RBP27.45■■□□□ 1.98
PDE6B-203ENST00000460119 UBE4AQ14139 1066 aa27.45■■□□□ 1.98
PDE6B-203ENST00000460119 PTPN18Q99952 460 aa27.45■■□□□ 1.98
PDE6B-203ENST00000460119 SPDYE2Q495Y8 402 aa27.44■■□□□ 1.98
PDE6B-203ENST00000460119 OTOP1Q7RTM1 612 aa27.44■■□□□ 1.98
PDE6B-203ENST00000460119 ELP3Q9H9T3 547 aa27.44■■□□□ 1.98
PDE6B-203ENST00000460119 RIPOR2Q9Y4F9 1068 aa27.44■■□□□ 1.98
PDE6B-203ENST00000460119 TCP10L2B9ZVM9 353 aa27.43■■□□□ 1.98
PDE6B-203ENST00000460119 DZIP1LQ8IYY4 767 aaKnown RBP27.43■■□□□ 1.98
PDE6B-203ENST00000460119 PDE4DIPQ5VU43 2346 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 CRHR2Q13324 411 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 LRRC24Q50LG9 513 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 PRPF38BQ5VTL8 546 aaKnown RBP27.42■■□□□ 1.98
PDE6B-203ENST00000460119 ANKRD13AQ8IZ07 590 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 CD99L2Q8TCZ2 262 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 CNKSR2Q8WXI2 1034 aa27.42■■□□□ 1.98
PDE6B-203ENST00000460119 CAP1Q01518 475 aa27.41■■□□□ 1.98
PDE6B-203ENST00000460119 TEPSINQ96N21 525 aa27.41■■□□□ 1.98
PDE6B-203ENST00000460119 TMEM39BQ9GZU3 492 aa27.41■■□□□ 1.98
PDE6B-203ENST00000460119 SERPINA10Q9UK55 444 aa27.41■■□□□ 1.98
PDE6B-203ENST00000460119 UNCXA6NJT0 531 aa27.4■■□□□ 1.98
PDE6B-203ENST00000460119 CRKP46108 304 aa27.4■■□□□ 1.98
PDE6B-203ENST00000460119 CHAF1AQ13111 956 aaPredicted RBP27.4■■□□□ 1.98
PDE6B-203ENST00000460119 FBXO33Q7Z6M2 555 aa27.4■■□□□ 1.98
PDE6B-203ENST00000460119 OPTNQ96CV9 577 aa27.4■■□□□ 1.98
PDE6B-203ENST00000460119 BICC1Q9H694 974 aaKnown RBP27.4■■□□□ 1.98
PDE6B-203ENST00000460119 TNRC18O15417 2968 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms