RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ARAP2Q8WZ64 1704 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 IL1R1P14778 569 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 GYG1P46976 350 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 ATP2B3Q16720 1220 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 TTLL5Q6EMB2 1281 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 SSH3Q8TE77 659 aa26.94■■□□□ 1.9
SSNA1-202ENST00000459860 GTF2IP78347 998 aa26.93■■□□□ 1.9
SSNA1-202ENST00000459860 POLA2Q14181 598 aa26.93■■□□□ 1.9
SSNA1-202ENST00000459860 CEP85Q6P2H3 762 aa26.93■■□□□ 1.9
SSNA1-202ENST00000459860 PGAP2Q9UHJ9 254 aa26.93■■□□□ 1.9
SSNA1-202ENST00000459860 FGFR2P21802 821 aa26.92■■□□□ 1.9
SSNA1-202ENST00000459860 LBX1P52954 281 aa26.92■■□□□ 1.9
SSNA1-202ENST00000459860 OS9Q13438 667 aaPredicted RBP26.92■■□□□ 1.9
SSNA1-202ENST00000459860 DACT2Q5SW24 774 aa26.92■■□□□ 1.9
SSNA1-202ENST00000459860 FAM84BQ96KN1 310 aaPredicted RBP26.92■■□□□ 1.9
SSNA1-202ENST00000459860 ZBTB40Q9NUA8 1239 aa26.92■■□□□ 1.9
SSNA1-202ENST00000459860 HSPA8P11142 646 aaKnown RBP26.91■■□□□ 1.9
SSNA1-202ENST00000459860 HIRAP54198 1017 aaPredicted RBP26.91■■□□□ 1.9
SSNA1-202ENST00000459860 AKAP2Q9Y2D5 859 aa26.91■■□□□ 1.9
SSNA1-202ENST00000459860 FRAT2O75474 233 aaPredicted RBP26.9■■□□□ 1.9
SSNA1-202ENST00000459860 MAP2K1Q02750 393 aaPredicted RBP26.9■■□□□ 1.9
SSNA1-202ENST00000459860 CAPNS2Q96L46 248 aa26.9■■□□□ 1.9
SSNA1-202ENST00000459860 TLL2Q9Y6L7 1015 aa26.9■■□□□ 1.9
SSNA1-202ENST00000459860 SURF6O75683 361 aaKnown RBP26.89■■□□□ 1.9
SSNA1-202ENST00000459860 RPAP2Q8IXW5 612 aaPredicted RBP26.89■■□□□ 1.9
SSNA1-202ENST00000459860 HMMRO75330 724 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 USP17L8P0C7I0 530 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 TFCP2Q12800 502 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 CYP4F22Q6NT55 531 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 FBXO33Q7Z6M2 555 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 OGFOD1Q8N543 542 aa26.88■■□□□ 1.89
SSNA1-202ENST00000459860 TDRD7Q8NHU6 1098 aaKnown RBP26.88■■□□□ 1.89
SSNA1-202ENST00000459860 SHTN1A0MZ66 631 aa26.87■■□□□ 1.89
SSNA1-202ENST00000459860 SASH1O94885 1247 aa26.87■■□□□ 1.89
SSNA1-202ENST00000459860 TRPM4Q8TD43 1214 aa26.87■■□□□ 1.89
SSNA1-202ENST00000459860 GLIS2Q9BZE0 524 aaPredicted RBP26.87■■□□□ 1.89
SSNA1-202ENST00000459860 TBC1D10BQ4KMP7 808 aaPredicted RBP26.86■■□□□ 1.89
SSNA1-202ENST00000459860 GMLQ99445 158 aa26.86■■□□□ 1.89
SSNA1-202ENST00000459860 MXD3Q9BW11 206 aa26.86■■□□□ 1.89
SSNA1-202ENST00000459860 GNL3LQ9NVN8 582 aaKnown RBP26.86■■□□□ 1.89
SSNA1-202ENST00000459860 HDAC9Q9UKV0 1011 aa26.86■■□□□ 1.89
SSNA1-202ENST00000459860 FAM205AQ6ZU69 1335 aa26.86■■□□□ 1.89
SSNA1-202ENST00000459860 ECE1P42892 770 aa26.85■■□□□ 1.89
SSNA1-202ENST00000459860 MMP14P50281 582 aa26.85■■□□□ 1.89
SSNA1-202ENST00000459860 BCAMP50895 628 aa26.85■■□□□ 1.89
SSNA1-202ENST00000459860 FKBP1AP62942 108 aaKnown RBP26.85■■□□□ 1.89
SSNA1-202ENST00000459860 KIF4BQ2VIQ3 1234 aa26.85■■□□□ 1.89
SSNA1-202ENST00000459860 SAMD7Q7Z3H4 446 aa26.85■■□□□ 1.89
SSNA1-202ENST00000459860 ZC3H15Q8WU90 426 aaKnown RBP26.85■■□□□ 1.89
SSNA1-202ENST00000459860 ZNF280AP59817 542 aaPredicted RBP26.84■■□□□ 1.89
SSNA1-202ENST00000459860 RBM26Q5T8P6 1007 aaKnown RBP26.84■■□□□ 1.89
SSNA1-202ENST00000459860 SAPCD2Q86UD0 394 aa26.84■■□□□ 1.89
SSNA1-202ENST00000459860 IQSEC3Q9UPP2 1182 aaPredicted RBP26.84■■□□□ 1.89
SSNA1-202ENST00000459860 JAG2Q9Y219 1238 aa26.84■■□□□ 1.89
SSNA1-202ENST00000459860 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
SSNA1-202ENST00000459860 THSD7BQ9C0I4 1608 aa26.83■■□□□ 1.89
SSNA1-202ENST00000459860 A0A1B0GUL7 405 aa26.83■■□□□ 1.89
SSNA1-202ENST00000459860 CELF2O95319 508 aaKnown RBP26.83■■□□□ 1.89
SSNA1-202ENST00000459860 HSP90AB4PQ58FF6 505 aa26.83■■□□□ 1.89
SSNA1-202ENST00000459860 KIAA0825Q8IV33 1275 aa26.83■■□□□ 1.89
SSNA1-202ENST00000459860 CHAF1AQ13111 956 aaPredicted RBP26.82■■□□□ 1.88
SSNA1-202ENST00000459860 PAXIP1Q6ZW49 1069 aaPredicted RBP26.82■■□□□ 1.88
SSNA1-202ENST00000459860 ERC1Q8IUD2 1116 aa26.82■■□□□ 1.88
SSNA1-202ENST00000459860 TBC1D22AQ8WUA7 517 aa26.82■■□□□ 1.88
SSNA1-202ENST00000459860 NEUROD6Q96NK8 337 aa26.82■■□□□ 1.88
SSNA1-202ENST00000459860 MYOZ2Q9NPC6 264 aa26.82■■□□□ 1.88
SSNA1-202ENST00000459860 TIMM10P62072 90 aa26.81■■□□□ 1.88
SSNA1-202ENST00000459860 MFSD14BQ5SR56 506 aa26.81■■□□□ 1.88
SSNA1-202ENST00000459860 GORABQ5T7V8 394 aa26.81■■□□□ 1.88
SSNA1-202ENST00000459860 AOC2O75106 756 aa26.8■■□□□ 1.88
SSNA1-202ENST00000459860 GRM1Q13255 1194 aa26.8■■□□□ 1.88
SSNA1-202ENST00000459860 GPR108Q9NPR9 543 aa26.8■■□□□ 1.88
SSNA1-202ENST00000459860 ADORA1P30542 326 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 MAP2K2P36507 400 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 CDC37L1Q7L3B6 337 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 CERS5Q8N5B7 392 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 XAGE2Q96GT9 111 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 HHIPL1Q96JK4 782 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 EXOC6BQ9Y2D4 811 aa26.79■■□□□ 1.88
SSNA1-202ENST00000459860 F8W031 263 aaPredicted RBP26.78■■□□□ 1.88
SSNA1-202ENST00000459860 SEMA3EO15041 775 aa26.78■■□□□ 1.88
SSNA1-202ENST00000459860 EGFRP00533 1210 aa26.78■■□□□ 1.88
SSNA1-202ENST00000459860 CCDC102BQ68D86 513 aa26.78■■□□□ 1.88
SSNA1-202ENST00000459860 PHKA1P46020 1223 aa26.77■■□□□ 1.88
SSNA1-202ENST00000459860 TNNI3KQ59H18 835 aa26.77■■□□□ 1.88
SSNA1-202ENST00000459860 DLK2Q6UY11 383 aa26.77■■□□□ 1.88
SSNA1-202ENST00000459860 DENND2AQ9ULE3 1009 aa26.77■■□□□ 1.88
SSNA1-202ENST00000459860 FPGT-TNNI3KV9GXZ4 949 aa26.77■■□□□ 1.88
SSNA1-202ENST00000459860 WDR66Q8TBY9 1149 aa26.76■■□□□ 1.87
SSNA1-202ENST00000459860 DCPSQ96C86 337 aaKnown RBP26.76■■□□□ 1.87
SSNA1-202ENST00000459860 CRBNQ96SW2 442 aa26.76■■□□□ 1.87
SSNA1-202ENST00000459860 ECM29Q5VYK3 1845 aa26.76■■□□□ 1.87
SSNA1-202ENST00000459860 TRPM7Q96QT4 1865 aa26.75■■□□□ 1.87
SSNA1-202ENST00000459860 USP48Q86UV5 1035 aa26.75■■□□□ 1.87
SSNA1-202ENST00000459860 SIRT2Q8IXJ6 389 aa26.75■■□□□ 1.87
SSNA1-202ENST00000459860 GGA3Q9NZ52 723 aa26.75■■□□□ 1.87
SSNA1-202ENST00000459860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.75■■□□□ 1.87
SSNA1-202ENST00000459860 SCARF1Q14162 830 aa26.74■■□□□ 1.87
SSNA1-202ENST00000459860 ABHD8Q96I13 439 aa26.74■■□□□ 1.87
SSNA1-202ENST00000459860 ZNF408Q9H9D4 720 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms