RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MAP3K12Q12852 859 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 WASHC4Q2M389 1173 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 SLC9C2Q5TAH2 1124 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 OSBP2Q969R2 916 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 GGA1Q9UJY5 639 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 SNX14Q9Y5W7 946 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 DLEC1Q9Y238 1755 aa29.3■■■□□ 2.28
U2AF1-204ENST00000459639 M0R2C6 588 aa29.3■■■□□ 2.28
U2AF1-204ENST00000459639 NSFL1CQ9UNZ2 370 aaKnown RBP29.3■■■□□ 2.28
U2AF1-204ENST00000459639 C10orf71Q711Q0 1435 aa29.29■■■□□ 2.28
U2AF1-204ENST00000459639 PDE6AP16499 860 aa29.29■■■□□ 2.28
U2AF1-204ENST00000459639 STYK1Q6J9G0 422 aa29.29■■■□□ 2.28
U2AF1-204ENST00000459639 PRPF40BQ6NWY9 871 aaKnown RBP29.29■■■□□ 2.28
U2AF1-204ENST00000459639 C2CD5Q86YS7 1000 aa29.29■■■□□ 2.28
U2AF1-204ENST00000459639 DSCC1Q9BVC3 393 aa29.29■■■□□ 2.28
U2AF1-204ENST00000459639 IQSEC3Q9UPP2 1182 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-204ENST00000459639 U3KPZ7 1027 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-204ENST00000459639 H0YIN7 160 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 ST18O60284 1047 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 UFL1O94874 794 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 TXNRD3Q86VQ6 643 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 WWC3Q9ULE0 1092 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 MAST2Q6P0Q8 1798 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 RNF20Q5VTR2 975 aa29.28■■■□□ 2.28
U2AF1-204ENST00000459639 CREB3L3Q68CJ9 461 aa29.27■■■□□ 2.28
U2AF1-204ENST00000459639 RASEFQ8IZ41 740 aa29.27■■■□□ 2.28
U2AF1-204ENST00000459639 ZNF532Q9HCE3 1301 aa29.26■■■□□ 2.27
U2AF1-204ENST00000459639 TCRBV5S4A2TA0A5A2 114 aa29.26■■■□□ 2.27
U2AF1-204ENST00000459639 ZKSCAN1P17029 563 aaPredicted RBP29.26■■■□□ 2.27
U2AF1-204ENST00000459639 ZNF804AQ7Z570 1209 aa29.26■■■□□ 2.27
U2AF1-204ENST00000459639 KIF13BQ9NQT8 1826 aa29.26■■■□□ 2.27
U2AF1-204ENST00000459639 DUOX1Q9NRD9 1551 aa29.26■■■□□ 2.27
U2AF1-204ENST00000459639 SLC27A2O14975 620 aa29.25■■■□□ 2.27
U2AF1-204ENST00000459639 CD2BP2O95400 341 aaKnown RBP29.25■■■□□ 2.27
U2AF1-204ENST00000459639 PUS7LQ9H0K6 701 aaKnown RBP29.25■■■□□ 2.27
U2AF1-204ENST00000459639 FRAT2O75474 233 aaPredicted RBP29.25■■■□□ 2.27
U2AF1-204ENST00000459639 CCDC88AQ3V6T2 1871 aa29.25■■■□□ 2.27
U2AF1-204ENST00000459639 TBC1D16Q8TBP0 767 aa29.25■■■□□ 2.27
U2AF1-204ENST00000459639 LRP2BPQ9P2M1 347 aa29.25■■■□□ 2.27
U2AF1-204ENST00000459639 HSPD1P10809 573 aaKnown RBP29.24■■■□□ 2.27
U2AF1-204ENST00000459639 MAGEB6Q8N7X4 407 aa29.24■■■□□ 2.27
U2AF1-204ENST00000459639 ZNF622Q969S3 477 aaKnown RBP eCLIP29.24■■■□□ 2.27
U2AF1-204ENST00000459639 K7ELQ4 463 aaPredicted RBP29.23■■■□□ 2.27
U2AF1-204ENST00000459639 NEK4P51957 841 aa29.23■■■□□ 2.27
U2AF1-204ENST00000459639 SLX4Q8IY92 1834 aa29.23■■■□□ 2.27
U2AF1-204ENST00000459639 KIAA1551Q9HCM1 1747 aa29.22■■■□□ 2.27
U2AF1-204ENST00000459639 GPAA1O43292 621 aa29.22■■■□□ 2.27
U2AF1-204ENST00000459639 TDRD7Q8NHU6 1098 aaKnown RBP29.22■■■□□ 2.27
U2AF1-204ENST00000459639 TM6SF1Q9BZW5 370 aa29.22■■■□□ 2.27
U2AF1-204ENST00000459639 TMX4Q9H1E5 349 aaPredicted RBP29.22■■■□□ 2.27
U2AF1-204ENST00000459639 TSGA10IPQ3SY00 556 aa29.21■■■□□ 2.27
U2AF1-204ENST00000459639 VPS53Q5VIR6 699 aa29.21■■■□□ 2.27
U2AF1-204ENST00000459639 CNKSR1Q969H4 720 aa29.21■■■□□ 2.27
U2AF1-204ENST00000459639 POLLQ9UGP5 575 aa29.21■■■□□ 2.27
U2AF1-204ENST00000459639 ABCF2Q9UG63 623 aa29.21■■■□□ 2.27
U2AF1-204ENST00000459639 RPAP1Q9BWH6 1393 aaPredicted RBP29.19■■■□□ 2.26
U2AF1-204ENST00000459639 IGSF3O75054 1194 aa29.19■■■□□ 2.26
U2AF1-204ENST00000459639 MCM2P49736 904 aa29.19■■■□□ 2.26
U2AF1-204ENST00000459639 ERICH6Q7L0X2 663 aa29.19■■■□□ 2.26
U2AF1-204ENST00000459639 MPNDQ8N594 471 aa29.19■■■□□ 2.26
U2AF1-204ENST00000459639 UPF1Q92900 1129 aaKnown RBP eCLIP29.19■■■□□ 2.26
U2AF1-204ENST00000459639 GPR101Q96P66 508 aaPredicted RBP29.19■■■□□ 2.26
U2AF1-204ENST00000459639 SALL1Q9NSC2 1324 aa29.19■■■□□ 2.26
U2AF1-204ENST00000459639 C6orf229H3BNL8 230 aa29.18■■■□□ 2.26
U2AF1-204ENST00000459639 CHRNA5P30532 468 aa29.18■■■□□ 2.26
U2AF1-204ENST00000459639 TMED8Q6PL24 325 aaPredicted RBP29.18■■■□□ 2.26
U2AF1-204ENST00000459639 RAI14Q9P0K7 980 aa29.18■■■□□ 2.26
U2AF1-204ENST00000459639 KRT32Q14532 448 aa29.18■■■□□ 2.26
U2AF1-204ENST00000459639 ZGPATQ8N5A5 531 aaKnown RBP29.18■■■□□ 2.26
U2AF1-204ENST00000459639 AIDAQ96BJ3 306 aa29.18■■■□□ 2.26
U2AF1-204ENST00000459639 UPF3BQ9BZI7 483 aaKnown RBP29.18■■■□□ 2.26
U2AF1-204ENST00000459639 IL1R1P14778 569 aa29.17■■■□□ 2.26
U2AF1-204ENST00000459639 PSMA5P28066 241 aa29.17■■■□□ 2.26
U2AF1-204ENST00000459639 CHAF1AQ13111 956 aaPredicted RBP29.17■■■□□ 2.26
U2AF1-204ENST00000459639 WDR66Q8TBY9 1149 aa29.17■■■□□ 2.26
U2AF1-204ENST00000459639 JAKMIP1Q96N16 626 aaKnown RBP29.17■■■□□ 2.26
U2AF1-204ENST00000459639 CD209Q9NNX6 404 aa29.17■■■□□ 2.26
U2AF1-204ENST00000459639 LAMA4Q16363 1823 aa29.17■■■□□ 2.26
U2AF1-204ENST00000459639 FOXP2O15409 715 aa29.16■■■□□ 2.26
U2AF1-204ENST00000459639 ADCK5Q3MIX3 580 aa29.16■■■□□ 2.26
U2AF1-204ENST00000459639 DPP8Q6V1X1 898 aaPredicted RBP29.16■■■□□ 2.26
U2AF1-204ENST00000459639 ZSWIM6Q9HCJ5 1215 aa29.16■■■□□ 2.26
U2AF1-204ENST00000459639 CTNNA3Q9UI47 895 aa29.16■■■□□ 2.26
U2AF1-204ENST00000459639 CYP21A2P08686 494 aa29.15■■■□□ 2.26
U2AF1-204ENST00000459639 CASTP20810 708 aaKnown RBP29.15■■■□□ 2.26
U2AF1-204ENST00000459639 SPTY2D1Q68D10 685 aaPredicted RBP29.15■■■□□ 2.26
U2AF1-204ENST00000459639 STRBPQ96SI9 672 aaKnown RBP29.15■■■□□ 2.26
U2AF1-204ENST00000459639 MTFR1LQ9H019 292 aa29.15■■■□□ 2.26
U2AF1-204ENST00000459639 CYP7A1P22680 504 aa29.14■■■□□ 2.26
U2AF1-204ENST00000459639 MBD4O95243 580 aa29.13■■■□□ 2.25
U2AF1-204ENST00000459639 OLFM4Q6UX06 510 aa29.13■■■□□ 2.25
U2AF1-204ENST00000459639 TTC14Q96N46 770 aa29.13■■■□□ 2.25
U2AF1-204ENST00000459639 CYP46A1Q9Y6A2 500 aa29.13■■■□□ 2.25
U2AF1-204ENST00000459639 NAA16Q6N069 864 aaPredicted RBP29.12■■■□□ 2.25
U2AF1-204ENST00000459639 ZBTB7AO95365 584 aa29.12■■■□□ 2.25
U2AF1-204ENST00000459639 ZMYM6O95789 1325 aa29.12■■■□□ 2.25
U2AF1-204ENST00000459639 GNAT2P19087 354 aa29.12■■■□□ 2.25
U2AF1-204ENST00000459639 RUFY3Q7L099 469 aa29.12■■■□□ 2.25
U2AF1-204ENST00000459639 NSUN4Q96CB9 384 aaKnown RBP29.12■■■□□ 2.25
U2AF1-204ENST00000459639 EYA3Q99504 573 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms