RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTLL11Q8NHH1 800 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 AIDAQ96BJ3 306 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 TAOK3Q9H2K8 898 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 CEP126Q9P2H0 1117 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 MYH7P12883 1935 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 NPHP1O15259 732 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 REC8O95072 547 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 ITGA6P23229 1130 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
VPS50-207ENST00000458530 TNNI3KQ59H18 835 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 TBC1D9BQ66K14 1250 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 STYK1Q6J9G0 422 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 TBC1D9Q6ZT07 1266 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 KLHDC4Q8TBB5 520 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
VPS50-207ENST00000458530 FPGT-TNNI3KV9GXZ4 949 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
VPS50-207ENST00000458530 RIC1Q4ADV7 1423 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
VPS50-207ENST00000458530 HIP1O00291 1037 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 SRGNP10124 158 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 TFCP2Q12800 502 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 TPTE2Q6XPS3 522 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
VPS50-207ENST00000458530 PI4K2BQ8TCG2 481 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 RFX7Q2KHR2 1363 aa10.86□□□□□ -0.67
VPS50-207ENST00000458530 MROH5Q6ZUA9 1318 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 SNED1Q8TER0 1413 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 IGHMBP2P38935 993 aaKnown RBP10.85□□□□□ -0.67
VPS50-207ENST00000458530 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
VPS50-207ENST00000458530 SOGA3Q5TF21 947 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
VPS50-207ENST00000458530 LDHAL6AQ6ZMR3 332 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 ATG9AQ7Z3C6 839 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 CNKSR1Q969H4 720 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 ZNF622Q969S3 477 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS50-207ENST00000458530 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
VPS50-207ENST00000458530 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 MPHOSPH8Q99549 860 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 GREM2Q9H772 168 aa10.85□□□□□ -0.67
VPS50-207ENST00000458530 DAXXQ9UER7 740 aaPredicted RBP10.85□□□□□ -0.67
VPS50-207ENST00000458530 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 EPB41L2O43491 1005 aaKnown RBP10.84□□□□□ -0.67
VPS50-207ENST00000458530 HCLS1P14317 486 aaPredicted RBP10.84□□□□□ -0.67
VPS50-207ENST00000458530 ATP5JP18859 108 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 METTL24Q5JXM2 366 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 SLC10A5Q5PT55 438 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
VPS50-207ENST00000458530 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
VPS50-207ENST00000458530 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
VPS50-207ENST00000458530 ZNF541Q9H0D2 1346 aa10.84□□□□□ -0.67
VPS50-207ENST00000458530 POTEMA6NI47 508 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 FZD9O00144 591 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 MCCP23508 829 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 ST5P78524 1137 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.68
VPS50-207ENST00000458530 BECN1Q14457 450 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
VPS50-207ENST00000458530 DEFB115Q30KQ5 88 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
VPS50-207ENST00000458530 LRRC24Q50LG9 513 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 CCDC158Q5M9N0 1113 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 TSHZ3Q63HK5 1081 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS50-207ENST00000458530 MASTLQ96GX5 879 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 ZNF594Q96JF6 807 aaPredicted RBP10.83□□□□□ -0.68
VPS50-207ENST00000458530 NLRP3Q96P20 1036 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
VPS50-207ENST00000458530 DIAPH3Q9NSV4 1193 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 HACL1Q9UJ83 578 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
VPS50-207ENST00000458530 A0A1B0GUL7 405 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 EPHX2P34913 555 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 PUM3Q15397 648 aaKnown RBP10.82□□□□□ -0.68
VPS50-207ENST00000458530 ATP2B3Q16720 1220 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 PNMA8AQ86V59 439 aaPredicted RBP10.82□□□□□ -0.68
VPS50-207ENST00000458530 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 CCDC24Q8N4L8 307 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 CNBD1Q8NA66 436 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 NEUROD6Q96NK8 337 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
VPS50-207ENST00000458530 DBNLQ9UJU6 430 aaKnown RBP10.82□□□□□ -0.68
VPS50-207ENST00000458530 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 RAD50Q92878 1312 aa10.82□□□□□ -0.68
VPS50-207ENST00000458530 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 SLC5A1P13866 664 aa10.81□□□□□ -0.68
VPS50-207ENST00000458530 CHMLP26374 656 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms