RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NEXNQ0ZGT2 675 aa18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 SREBF2Q12772 1141 aa18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 NOM1Q5C9Z4 860 aaKnown RBP18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 KSR2Q6VAB6 950 aa18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 GREM2Q9H772 168 aa18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 TRPC6Q9Y210 931 aa18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
UPF3AP2-201ENST00000457924 GPR25O00155 361 aa18.43■□□□□ 0.54
UPF3AP2-201ENST00000457924 MKRN3Q13064 507 aaKnown RBP18.43■□□□□ 0.54
UPF3AP2-201ENST00000457924 ARMC9Q7Z3E5 817 aa18.43■□□□□ 0.54
UPF3AP2-201ENST00000457924 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 SASH1O94885 1247 aa18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 IGKV5-2P06315 115 aa18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 IGHMBP2P38935 993 aaKnown RBP18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 LEMD3Q9Y2U8 911 aa18.42■□□□□ 0.54
UPF3AP2-201ENST00000457924 PTPN12Q05209 780 aaKnown RBP18.41■□□□□ 0.54
UPF3AP2-201ENST00000457924 TTLL5Q6EMB2 1281 aa18.41■□□□□ 0.54
UPF3AP2-201ENST00000457924 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
UPF3AP2-201ENST00000457924 FKTNO75072 461 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 PRKG1Q13976 671 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 TXNRD3Q86VQ6 643 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 KIAA0825Q8IV33 1275 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 CFHR5Q9BXR6 569 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 ZNF804BA4D1E1 1349 aa18.4■□□□□ 0.54
UPF3AP2-201ENST00000457924 NEURL1BA8MQ27 555 aa18.39■□□□□ 0.53
UPF3AP2-201ENST00000457924 CWF19L2Q2TBE0 894 aaKnown RBP18.39■□□□□ 0.53
UPF3AP2-201ENST00000457924 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
UPF3AP2-201ENST00000457924 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
UPF3AP2-201ENST00000457924 H7C1W4 665 aa18.38■□□□□ 0.53
UPF3AP2-201ENST00000457924 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
UPF3AP2-201ENST00000457924 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
UPF3AP2-201ENST00000457924 ANGEL1Q9UNK9 670 aaKnown RBP18.38■□□□□ 0.53
UPF3AP2-201ENST00000457924 KCNJ4P48050 445 aa18.37■□□□□ 0.53
UPF3AP2-201ENST00000457924 GTF2IP78347 998 aa18.37■□□□□ 0.53
UPF3AP2-201ENST00000457924 LDLRAD1Q5T700 205 aa18.37■□□□□ 0.53
UPF3AP2-201ENST00000457924 SPRYD7Q5W111 196 aa18.37■□□□□ 0.53
UPF3AP2-201ENST00000457924 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
UPF3AP2-201ENST00000457924 COL1A1P02452 1464 aaPredicted RBP18.36■□□□□ 0.53
UPF3AP2-201ENST00000457924 ITGA6P23229 1130 aa18.36■□□□□ 0.53
UPF3AP2-201ENST00000457924 ZBED3Q96IU2 234 aaPredicted RBP18.36■□□□□ 0.53
UPF3AP2-201ENST00000457924 KLRK1P26718 216 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 INHBEP58166 350 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 PDAP1Q13442 181 aaKnown RBP18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 DLGAP5Q15398 846 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 PLA2G12BQ9BX93 195 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 DEFB129Q9H1M3 183 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
UPF3AP2-201ENST00000457924 MANSC4A6NHS7 340 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 GCKRQ14397 625 aa18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 CD209Q9NNX6 404 aa18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 ECM29Q5VYK3 1845 aa18.34■□□□□ 0.53
UPF3AP2-201ENST00000457924 PPP1R12BO60237 982 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 ZBTB48P10074 688 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 PSEN1P49768 467 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 CHRNDQ07001 517 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 MAP3K11Q16584 847 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 TWISTNBQ3B726 338 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 G2E3Q7L622 706 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 MYH16Q9H6N6 1097 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 FZD1Q9UP38 647 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.52
UPF3AP2-201ENST00000457924 MYO1BO43795 1136 aa18.32■□□□□ 0.52
UPF3AP2-201ENST00000457924 CSF1RP07333 972 aa18.32■□□□□ 0.52
UPF3AP2-201ENST00000457924 TIE1P35590 1138 aa18.32■□□□□ 0.52
UPF3AP2-201ENST00000457924 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
UPF3AP2-201ENST00000457924 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
UPF3AP2-201ENST00000457924 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
UPF3AP2-201ENST00000457924 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
UPF3AP2-201ENST00000457924 WNK4Q96J92 1243 aa18.31■□□□□ 0.52
UPF3AP2-201ENST00000457924 LAMB1P07942 1786 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 UNCXA6NJT0 531 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 CASP7P55210 303 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 SUPT20HL1Q3ZLR7 823 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 CERS5Q8N5B7 392 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 BMP2KQ9NSY1 1161 aaPredicted RBP18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
UPF3AP2-201ENST00000457924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 TAF5LO75529 589 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 FLIIQ13045 1269 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 CFAP100Q494V2 611 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 C15orf52Q6ZUT6 534 aaKnown RBP18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 ZNF804AQ7Z570 1209 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
UPF3AP2-201ENST00000457924 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
UPF3AP2-201ENST00000457924 IREB2P48200 963 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms