RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 EGFRP00533 1210 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 FGFR2P21802 821 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 FMR1Q06787 632 aaKnown RBP eCLIP28.73■■■□□ 2.19
CBX3-204ENST00000456948 G3BP1Q13283 466 aaKnown RBP eCLIP28.73■■■□□ 2.19
CBX3-204ENST00000456948 ATP2B3Q16720 1220 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 USP48Q86UV5 1035 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 TBC1D22AQ8WUA7 517 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 GNL3LQ9NVN8 582 aaKnown RBP28.73■■■□□ 2.19
CBX3-204ENST00000456948 ABT1Q9ULW3 272 aaKnown RBP28.73■■■□□ 2.19
CBX3-204ENST00000456948 AKAP2Q9Y2D5 859 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 TRAF5O00463 557 aa28.72■■■□□ 2.19
CBX3-204ENST00000456948 RLBP1P12271 317 aa28.72■■■□□ 2.19
CBX3-204ENST00000456948 MFSD14BQ5SR56 506 aa28.71■■■□□ 2.19
CBX3-204ENST00000456948 PANK1Q8TE04 598 aa28.71■■■□□ 2.19
CBX3-204ENST00000456948 GGA3Q9NZ52 723 aa28.71■■■□□ 2.19
CBX3-204ENST00000456948 CNTNAP1P78357 1384 aa28.71■■■□□ 2.19
CBX3-204ENST00000456948 PITPNM2Q9BZ72 1349 aa28.7■■■□□ 2.19
CBX3-204ENST00000456948 CELF2O95319 508 aaKnown RBP28.7■■■□□ 2.18
CBX3-204ENST00000456948 BCAMP50895 628 aa28.7■■■□□ 2.18
CBX3-204ENST00000456948 ATP8B2P98198 1209 aa28.7■■■□□ 2.18
CBX3-204ENST00000456948 PCNTO95613 3336 aa28.69■■■□□ 2.18
CBX3-204ENST00000456948 DLGAP5Q15398 846 aa28.69■■■□□ 2.18
CBX3-204ENST00000456948 ANGEL2Q5VTE6 544 aaKnown RBP28.69■■■□□ 2.18
CBX3-204ENST00000456948 DDX19BQ9UMR2 479 aa28.69■■■□□ 2.18
CBX3-204ENST00000456948 TRPM7Q96QT4 1865 aa28.68■■■□□ 2.18
CBX3-204ENST00000456948 F8W031 263 aaPredicted RBP28.68■■■□□ 2.18
CBX3-204ENST00000456948 MYO1BO43795 1136 aa28.68■■■□□ 2.18
CBX3-204ENST00000456948 DEFB115Q30KQ5 88 aa28.68■■■□□ 2.18
CBX3-204ENST00000456948 ZNF408Q9H9D4 720 aa28.68■■■□□ 2.18
CBX3-204ENST00000456948 JAG2Q9Y219 1238 aa28.68■■■□□ 2.18
CBX3-204ENST00000456948 HSPA1AP0DMV8 641 aaKnown RBP28.67■■■□□ 2.18
CBX3-204ENST00000456948 HSPA1BP0DMV9 641 aaKnown RBP28.67■■■□□ 2.18
CBX3-204ENST00000456948 CHAF1AQ13111 956 aaPredicted RBP28.67■■■□□ 2.18
CBX3-204ENST00000456948 CERS5Q8N5B7 392 aa28.67■■■□□ 2.18
CBX3-204ENST00000456948 POLR2AP24928 1970 aaKnown RBP28.67■■■□□ 2.18
CBX3-204ENST00000456948 PNMA6EA0A0J9YXQ4 647 aa28.66■■■□□ 2.18
CBX3-204ENST00000456948 WNT10BO00744 389 aa28.66■■■□□ 2.18
CBX3-204ENST00000456948 VEGFBP49765 207 aa28.66■■■□□ 2.18
CBX3-204ENST00000456948 RBM5P52756 815 aaKnown RBP eCLIP28.66■■■□□ 2.18
CBX3-204ENST00000456948 OS9Q13438 667 aaPredicted RBP28.66■■■□□ 2.18
CBX3-204ENST00000456948 MVPQ14764 893 aaKnown RBP28.66■■■□□ 2.18
CBX3-204ENST00000456948 YTHDC1Q96MU7 727 aaKnown RBP28.66■■■□□ 2.18
CBX3-204ENST00000456948 IQSEC3Q9UPP2 1182 aaPredicted RBP28.66■■■□□ 2.18
CBX3-204ENST00000456948 PDE3AQ14432 1141 aa28.65■■■□□ 2.18
CBX3-204ENST00000456948 NBPF9Q3BBW0 867 aa28.65■■■□□ 2.18
CBX3-204ENST00000456948 CST9Q5W186 159 aa28.65■■■□□ 2.18
CBX3-204ENST00000456948 MTMR14Q8NCE2 650 aa28.65■■■□□ 2.18
CBX3-204ENST00000456948 C1orf115Q9H7X2 142 aa28.65■■■□□ 2.18
CBX3-204ENST00000456948 TTF2Q9UNY4 1162 aaKnown RBP28.65■■■□□ 2.18
CBX3-204ENST00000456948 APOBEC3FQ8IUX4 373 aaKnown RBP28.64■■■□□ 2.18
CBX3-204ENST00000456948 WDR66Q8TBY9 1149 aa28.64■■■□□ 2.18
CBX3-204ENST00000456948 SSH3Q8TE77 659 aa28.64■■■□□ 2.18
CBX3-204ENST00000456948 SUGT1Q9Y2Z0 365 aa28.64■■■□□ 2.18
CBX3-204ENST00000456948 RASSF10A6NK89 507 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 SEMA3EO15041 775 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 ECE1P42892 770 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 TFCP2Q12800 502 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 POLA2Q14181 598 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 PAXIP1Q6ZW49 1069 aaPredicted RBP28.63■■■□□ 2.17
CBX3-204ENST00000456948 C2orf69Q8N8R5 385 aa28.63■■■□□ 2.17
CBX3-204ENST00000456948 ADM5C9JUS6 153 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 SURF6O75683 361 aaKnown RBP28.62■■■□□ 2.17
CBX3-204ENST00000456948 CFAP100Q494V2 611 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 GORABQ5T7V8 394 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 SERPINA10Q9UK55 444 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 COG6Q9Y2V7 657 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 TLL2Q9Y6L7 1015 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 MAST3O60307 1309 aa28.62■■■□□ 2.17
CBX3-204ENST00000456948 ZNF646O15015 1829 aaPredicted RBP28.62■■■□□ 2.17
CBX3-204ENST00000456948 NEUROD6Q96NK8 337 aa28.61■■■□□ 2.17
CBX3-204ENST00000456948 DENND2AQ9ULE3 1009 aa28.61■■■□□ 2.17
CBX3-204ENST00000456948 ASTN2O75129 1339 aaPredicted RBP28.61■■■□□ 2.17
CBX3-204ENST00000456948 A0A1B0GUL7 405 aa28.6■■■□□ 2.17
CBX3-204ENST00000456948 TIMM10P62072 90 aa28.6■■■□□ 2.17
CBX3-204ENST00000456948 NF2P35240 595 aa28.59■■■□□ 2.17
CBX3-204ENST00000456948 HDLBPQ00341 1268 aaKnown RBP28.59■■■□□ 2.17
CBX3-204ENST00000456948 GRM1Q13255 1194 aa28.59■■■□□ 2.17
CBX3-204ENST00000456948 HHIPL1Q96JK4 782 aa28.59■■■□□ 2.17
CBX3-204ENST00000456948 SPDYE2BA6NHP3 402 aa28.58■■■□□ 2.17
CBX3-204ENST00000456948 HMMRO75330 724 aa28.58■■■□□ 2.17
CBX3-204ENST00000456948 SPDYE6P0CI01 402 aa28.58■■■□□ 2.17
CBX3-204ENST00000456948 SAPCD2Q86UD0 394 aa28.58■■■□□ 2.17
CBX3-204ENST00000456948 ZGPATQ8N5A5 531 aaKnown RBP28.58■■■□□ 2.17
CBX3-204ENST00000456948 CDCA5Q96FF9 252 aa28.58■■■□□ 2.17
CBX3-204ENST00000456948 ZBED3Q96IU2 234 aaPredicted RBP28.58■■■□□ 2.17
CBX3-204ENST00000456948 GBA2Q9HCG7 927 aaPredicted RBP28.58■■■□□ 2.17
CBX3-204ENST00000456948 HSP90AB4PQ58FF6 505 aa28.57■■■□□ 2.16
CBX3-204ENST00000456948 CCDC102BQ68D86 513 aa28.57■■■□□ 2.16
CBX3-204ENST00000456948 CEP85Q6P2H3 762 aa28.57■■■□□ 2.16
CBX3-204ENST00000456948 RPAP2Q8IXW5 612 aaPredicted RBP28.57■■■□□ 2.16
CBX3-204ENST00000456948 XAGE2Q96GT9 111 aa28.57■■■□□ 2.16
CBX3-204ENST00000456948 MRIQ9BWK5 157 aa28.57■■■□□ 2.16
CBX3-204ENST00000456948 WDR33Q9C0J8 1336 aaKnown RBP28.57■■■□□ 2.16
CBX3-204ENST00000456948 ZBTB22O15209 634 aa28.56■■■□□ 2.16
CBX3-204ENST00000456948 IFFO2Q5TF58 517 aa28.56■■■□□ 2.16
CBX3-204ENST00000456948 DLK2Q6UY11 383 aa28.56■■■□□ 2.16
CBX3-204ENST00000456948 TEKT1Q969V4 418 aa28.56■■■□□ 2.16
CBX3-204ENST00000456948 GPR108Q9NPR9 543 aa28.56■■■□□ 2.16
CBX3-204ENST00000456948 NOP58Q9Y2X3 529 aaKnown RBP28.56■■■□□ 2.16
CBX3-204ENST00000456948 PHKA1P46020 1223 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms