RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
LMCD1-206ENST00000456506 TAF5LO75529 589 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 NF2P35240 595 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 PRKG1Q13976 671 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
LMCD1-206ENST00000456506 ARMC9Q7Z3E5 817 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 MPHOSPH8Q99549 860 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 MYH16Q9H6N6 1097 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 HDAC9Q9UKV0 1011 aa15.21■□□□□ 0.03
LMCD1-206ENST00000456506 ANGEL1Q9UNK9 670 aaKnown RBP15.21■□□□□ 0.03
LMCD1-206ENST00000456506 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
LMCD1-206ENST00000456506 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
LMCD1-206ENST00000456506 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
LMCD1-206ENST00000456506 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
LMCD1-206ENST00000456506 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
LMCD1-206ENST00000456506 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
LMCD1-206ENST00000456506 CLMNQ96JQ2 1002 aa15.2■□□□□ 0.02
LMCD1-206ENST00000456506 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
LMCD1-206ENST00000456506 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
LMCD1-206ENST00000456506 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMCD1-206ENST00000456506 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
LMCD1-206ENST00000456506 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
LMCD1-206ENST00000456506 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
LMCD1-206ENST00000456506 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
LMCD1-206ENST00000456506 FKTNO75072 461 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
LMCD1-206ENST00000456506 GJA5P36382 358 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 CAP1Q01518 475 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
LMCD1-206ENST00000456506 FAM205AQ6ZU69 1335 aa15.17■□□□□ 0.02
LMCD1-206ENST00000456506 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
LMCD1-206ENST00000456506 F6X3S4 739 aa15.17■□□□□ 0.02
LMCD1-206ENST00000456506 KCNJ4P48050 445 aa15.17■□□□□ 0.02
LMCD1-206ENST00000456506 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
LMCD1-206ENST00000456506 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
LMCD1-206ENST00000456506 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
LMCD1-206ENST00000456506 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
LMCD1-206ENST00000456506 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
LMCD1-206ENST00000456506 CLRN2A0PK11 232 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 UNCXA6NJT0 531 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 INHBEP58166 350 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
LMCD1-206ENST00000456506 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
LMCD1-206ENST00000456506 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
LMCD1-206ENST00000456506 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
LMCD1-206ENST00000456506 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
LMCD1-206ENST00000456506 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
LMCD1-206ENST00000456506 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
LMCD1-206ENST00000456506 TEPSINQ96N21 525 aa15.15■□□□□ 0.02
LMCD1-206ENST00000456506 PTPN18Q99952 460 aa15.15■□□□□ 0.02
LMCD1-206ENST00000456506 JAG2Q9Y219 1238 aa15.15■□□□□ 0.02
LMCD1-206ENST00000456506 MGAMO43451 1857 aa15.14■□□□□ 0.01
LMCD1-206ENST00000456506 ZNF804AQ7Z570 1209 aa15.14■□□□□ 0.01
LMCD1-206ENST00000456506 CDAN1Q8IWY9 1227 aa15.14■□□□□ 0.01
LMCD1-206ENST00000456506 TDRD7Q8NHU6 1098 aaKnown RBP15.14■□□□□ 0.01
LMCD1-206ENST00000456506 SLC10A4Q96EP9 437 aa15.14■□□□□ 0.01
LMCD1-206ENST00000456506 GRM8O00222 908 aa15.13■□□□□ 0.01
LMCD1-206ENST00000456506 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
LMCD1-206ENST00000456506 RASA3Q14644 834 aa15.13■□□□□ 0.01
LMCD1-206ENST00000456506 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
LMCD1-206ENST00000456506 KIAA0100Q14667 2235 aaKnown RBP15.12■□□□□ 0.01
LMCD1-206ENST00000456506 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
LMCD1-206ENST00000456506 CRHR2Q13324 411 aa15.12■□□□□ 0.01
LMCD1-206ENST00000456506 SUPT20HL1Q3ZLR7 823 aa15.12■□□□□ 0.01
LMCD1-206ENST00000456506 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
LMCD1-206ENST00000456506 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
LMCD1-206ENST00000456506 MYO1BO43795 1136 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 GRIK5Q16478 980 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.11■□□□□ 0.01
LMCD1-206ENST00000456506 ANKRD13AQ8IZ07 590 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 FAM84BQ96KN1 310 aaPredicted RBP15.11■□□□□ 0.01
LMCD1-206ENST00000456506 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
LMCD1-206ENST00000456506 VEZTQ9HBM0 779 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 ZNF70Q9UC06 446 aaPredicted RBP15.11■□□□□ 0.01
LMCD1-206ENST00000456506 PTPN22Q9Y2R2 807 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 PTPRFP10586 1907 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 UTYO14607 1347 aa15.11■□□□□ 0.01
LMCD1-206ENST00000456506 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 GYG1P46976 350 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 UBE4AQ14139 1066 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 MFSD14BQ5SR56 506 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
LMCD1-206ENST00000456506 SERPINA10Q9UK55 444 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
LMCD1-206ENST00000456506 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 PLIN1O60240 522 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 IREB2P48200 963 aaKnown RBP15.09■□□□□ 0.01
LMCD1-206ENST00000456506 CD99L2Q8TCZ2 262 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
LMCD1-206ENST00000456506 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms