RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 LOC102724428A0A0B4J2F2 783 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 ERC2O15083 957 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 CLSTN1O94985 981 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 TNNT1P13805 278 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 SIK1P57059 783 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 TRDNQ13061 729 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 HLFQ16534 295 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 ZSCAN26Q16670 478 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 MCTP2Q6DN12 878 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 GOLGA5Q8TBA6 731 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 USP26Q9BXU7 913 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 BSDC1Q9NW68 430 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-218ENST00000456174 CHMP3Q9Y3E7 222 aa8.93□□□□□ -0.98
HDAC9-218ENST00000456174 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-218ENST00000456174 COL5A3P25940 1745 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-218ENST00000456174 PPP1R12AO14974 1030 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 GLRX3O76003 335 aaKnown RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 MAP4K4O95819 1239 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CHMLP26374 656 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 PLA2G4AP47712 749 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 NBPF9Q3BBW0 867 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 EAF2Q96CJ1 260 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 GPATCH3Q96I76 525 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CEP89Q96ST8 783 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 UBXN6Q9BZV1 441 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 ECHDC1Q9NTX5 307 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CCDC87Q9NVE4 849 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 MYH3P11055 1940 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 ZNF831Q5JPB2 1677 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 KIF3CO14782 793 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CPP00450 1065 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 PCCAP05165 728 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CRKLP46109 303 aaKnown RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 GPS2Q13227 327 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 SEMA3FQ13275 785 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 ITPK1Q13572 414 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 CCDC8Q9H0W5 538 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-218ENST00000456174 PSD3Q9NYI0 1048 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 TBC1D2BQ9UPU7 963 aa8.92□□□□□ -0.98
HDAC9-218ENST00000456174 ERVV-1B6SEH8 477 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 GPTP24298 496 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 DNAJC21Q5F1R6 531 aaKnown RBP8.91□□□□□ -0.98
HDAC9-218ENST00000456174 CNTROBQ8N137 903 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-218ENST00000456174 BTAF1O14981 1849 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 CCDC196A0A1B0GTZ2 297 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 EIF5P55010 431 aaKnown RBP8.91□□□□□ -0.98
HDAC9-218ENST00000456174 TFCP2Q12800 502 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 NLRP10Q86W26 655 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 ZBTB38Q8NAP3 1195 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-218ENST00000456174 FAM89AQ96GI7 184 aa8.91□□□□□ -0.98
HDAC9-218ENST00000456174 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-218ENST00000456174 PNMA6AP0CW24 399 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-218ENST00000456174 SART3Q15020 963 aaKnown RBP8.9□□□□□ -0.98
HDAC9-218ENST00000456174 CCDC183Q5T5S1 534 aa8.9□□□□□ -0.98
HDAC9-218ENST00000456174 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
HDAC9-218ENST00000456174 NHSQ6T4R5 1651 aa8.9□□□□□ -0.98
HDAC9-218ENST00000456174 AFF2P51816 1311 aa8.9□□□□□ -0.99
HDAC9-218ENST00000456174 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 CALRP27797 417 aaKnown RBP8.89□□□□□ -0.99
HDAC9-218ENST00000456174 ELF2Q15723 593 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 GTF3C6Q969F1 213 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 GJD4Q96KN9 370 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-218ENST00000456174 C16orf45Q96MC5 204 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-218ENST00000456174 PLA2G12BQ9BX93 195 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 ATP8B1O43520 1251 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 ZRANB2O95218 330 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC9-218ENST00000456174 LRCH2Q5VUJ6 765 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 MMS22LQ6ZRQ5 1243 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 ATG9AQ7Z3C6 839 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 SMARCE1Q969G3 411 aa8.89□□□□□ -0.99
HDAC9-218ENST00000456174 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-218ENST00000456174 AP5Z1O43299 807 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 BRD1O95696 1058 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 MAP2K2P36507 400 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 ZKSCAN8Q15776 578 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-218ENST00000456174 CCDC57Q2TAC2 916 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 CEP135Q66GS9 1140 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 ZNF34Q8IZ26 560 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 PPM1EQ8WY54 764 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 FUCA2Q9BTY2 467 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 TRMT112Q9UI30 125 aaKnown RBP8.88□□□□□ -0.99
HDAC9-218ENST00000456174 KLHL33A6NCF5 533 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 EYA2O00167 538 aa8.88□□□□□ -0.99
HDAC9-218ENST00000456174 CSF1RP07333 972 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms