RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 LRRC24Q50LG9 513 aa15.04■□□□□ -0
PDGFB-204ENST00000455790 KLHDC4Q8TBB5 520 aa15.04■□□□□ -0
PDGFB-204ENST00000455790 RIPOR2Q9Y4F9 1068 aa15.04■□□□□ -0
PDGFB-204ENST00000455790 F8W031 263 aaPredicted RBP15.03■□□□□ -0
PDGFB-204ENST00000455790 SLC10A3P09131 477 aa15.03■□□□□ -0
PDGFB-204ENST00000455790 UBE4AQ14139 1066 aa15.02■□□□□ -0
PDGFB-204ENST00000455790 RASAL3Q86YV0 1011 aa15.02■□□□□ -0
PDGFB-204ENST00000455790 VGLL2Q8N8G2 317 aa15.02■□□□□ -0
PDGFB-204ENST00000455790 HDAC9Q9UKV0 1011 aa15.02■□□□□ -0
PDGFB-204ENST00000455790 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
PDGFB-204ENST00000455790 KIF23Q02241 960 aaPredicted RBP15.01□□□□□ -0.01
PDGFB-204ENST00000455790 FAM84BQ96KN1 310 aaPredicted RBP15.01□□□□□ -0.01
PDGFB-204ENST00000455790 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
PDGFB-204ENST00000455790 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 SSC5DA1L4H1 1573 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 UBE2Q2LH0YL09 131 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 CA12O43570 354 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 HIBADHP31937 336 aaKnown RBP15□□□□□ -0.01
PDGFB-204ENST00000455790 RFX5P48382 616 aaPredicted RBP15□□□□□ -0.01
PDGFB-204ENST00000455790 MMP14P50281 582 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 FKBP1BP68106 108 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 DLGAP5Q15398 846 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 CFAP100Q494V2 611 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 METTL24Q5JXM2 366 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
PDGFB-204ENST00000455790 CCDC102AQ96A19 550 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 IQSEC3Q9UPP2 1182 aaPredicted RBP15□□□□□ -0.01
PDGFB-204ENST00000455790 ARAP2Q8WZ64 1704 aa15□□□□□ -0.01
PDGFB-204ENST00000455790 CLRN2A0PK11 232 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
PDGFB-204ENST00000455790 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 RARSP54136 660 aaKnown RBP14.99□□□□□ -0.01
PDGFB-204ENST00000455790 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
PDGFB-204ENST00000455790 GRIK5Q16478 980 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
PDGFB-204ENST00000455790 MTMR14Q8NCE2 650 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 FZD1Q9UP38 647 aa14.99□□□□□ -0.01
PDGFB-204ENST00000455790 PRKG1Q13976 671 aa14.98□□□□□ -0.01
PDGFB-204ENST00000455790 TTLL12Q14166 644 aaPredicted RBP14.98□□□□□ -0.01
PDGFB-204ENST00000455790 MFSD14BQ5SR56 506 aa14.98□□□□□ -0.01
PDGFB-204ENST00000455790 FBXO33Q7Z6M2 555 aa14.98□□□□□ -0.01
PDGFB-204ENST00000455790 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
PDGFB-204ENST00000455790 COL1A1P02452 1464 aaPredicted RBP14.97□□□□□ -0.01
PDGFB-204ENST00000455790 PDE8BO95263 885 aa14.97□□□□□ -0.01
PDGFB-204ENST00000455790 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
PDGFB-204ENST00000455790 DEFB129Q9H1M3 183 aa14.97□□□□□ -0.01
PDGFB-204ENST00000455790 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 FGFR2P21802 821 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 BCAMP50895 628 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 PTPN12Q05209 780 aaKnown RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 ABHD8Q96I13 439 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 MEIS3Q99687 375 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 VEZTQ9HBM0 779 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 RNF186Q9NXI6 227 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
PDGFB-204ENST00000455790 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
PDGFB-204ENST00000455790 EYA2O00167 538 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 TRPA1O75762 1119 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 NF2P35240 595 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 RBM5P52756 815 aaKnown RBP eCLIP14.95□□□□□ -0.02
PDGFB-204ENST00000455790 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
PDGFB-204ENST00000455790 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
PDGFB-204ENST00000455790 ATG9AQ7Z3C6 839 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 MIER1Q8N108 512 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 SIL1Q9H173 461 aa14.95□□□□□ -0.02
PDGFB-204ENST00000455790 CASP8AP2Q9UKL3 1982 aa14.94□□□□□ -0.02
PDGFB-204ENST00000455790 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
PDGFB-204ENST00000455790 SAGE1Q9NXZ1 904 aa14.94□□□□□ -0.02
PDGFB-204ENST00000455790 ANGEL1Q9UNK9 670 aaKnown RBP14.94□□□□□ -0.02
PDGFB-204ENST00000455790 MYO1BO43795 1136 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 CAVIN4Q5BKX8 364 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 LDLRAD1Q5T700 205 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 ARMC9Q7Z3E5 817 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 CDAN1Q8IWY9 1227 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 TDRD3Q9H7E2 651 aaKnown RBP14.93□□□□□ -0.02
PDGFB-204ENST00000455790 ZNF70Q9UC06 446 aaPredicted RBP14.93□□□□□ -0.02
PDGFB-204ENST00000455790 SERPINA10Q9UK55 444 aa14.93□□□□□ -0.02
PDGFB-204ENST00000455790 PA2G4Q9UQ80 394 aaKnown RBP14.93□□□□□ -0.02
PDGFB-204ENST00000455790 BCAR3O75815 825 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
PDGFB-204ENST00000455790 CRKP46108 304 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 RASA3Q14644 834 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 NBPF12Q5TAG4 269 aaPredicted RBP14.92□□□□□ -0.02
PDGFB-204ENST00000455790 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
PDGFB-204ENST00000455790 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 MCOLN1Q9GZU1 580 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 PPP2R3BQ9Y5P8 575 aa14.92□□□□□ -0.02
PDGFB-204ENST00000455790 FRAT2O75474 233 aaPredicted RBP14.91□□□□□ -0.02
PDGFB-204ENST00000455790 TRIM27P14373 513 aa14.91□□□□□ -0.02
PDGFB-204ENST00000455790 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
PDGFB-204ENST00000455790 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
PDGFB-204ENST00000455790 AKAP11Q9UKA4 1901 aa14.9□□□□□ -0.02
PDGFB-204ENST00000455790 CIAO1O76071 339 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms