RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 H7C1W4 665 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 MYO1BO43795 1136 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 CHRNDQ07001 517 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 OTUD7BQ6GQQ9 843 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 CERS5Q8N5B7 392 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 STK31Q9BXU1 1019 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 CENPFP49454 3210 aa29.78■■■□□ 2.36
PTPRA-208ENST00000455631 DDX10Q13206 875 aaKnown RBP29.77■■■□□ 2.36
PTPRA-208ENST00000455631 SUPT20HL1Q3ZLR7 823 aa29.77■■■□□ 2.36
PTPRA-208ENST00000455631 MTMR14Q8NCE2 650 aa29.77■■■□□ 2.36
PTPRA-208ENST00000455631 VEZTQ9HBM0 779 aa29.77■■■□□ 2.36
PTPRA-208ENST00000455631 IREB2P48200 963 aaKnown RBP29.76■■■□□ 2.35
PTPRA-208ENST00000455631 EFCC1Q9HA90 598 aa29.76■■■□□ 2.35
PTPRA-208ENST00000455631 KIAA0100Q14667 2235 aaKnown RBP29.76■■■□□ 2.35
PTPRA-208ENST00000455631 UNCXA6NJT0 531 aa29.75■■■□□ 2.35
PTPRA-208ENST00000455631 EN2P19622 333 aaPredicted RBP29.75■■■□□ 2.35
PTPRA-208ENST00000455631 CFAP100Q494V2 611 aa29.75■■■□□ 2.35
PTPRA-208ENST00000455631 ARMC5Q96C12 935 aa29.75■■■□□ 2.35
PTPRA-208ENST00000455631 PLA2G12BQ9BX93 195 aa29.75■■■□□ 2.35
PTPRA-208ENST00000455631 A0A1B0GUL6 1792 aa29.75■■■□□ 2.35
PTPRA-208ENST00000455631 OTOFQ9HC10 1997 aa29.74■■■□□ 2.35
PTPRA-208ENST00000455631 GJA5P36382 358 aa29.74■■■□□ 2.35
PTPRA-208ENST00000455631 NBPF12Q5TAG4 269 aaPredicted RBP29.74■■■□□ 2.35
PTPRA-208ENST00000455631 SPDYE2BA6NHP3 402 aa29.73■■■□□ 2.35
PTPRA-208ENST00000455631 SNAP23O00161 211 aa29.73■■■□□ 2.35
PTPRA-208ENST00000455631 SPDYE6P0CI01 402 aa29.73■■■□□ 2.35
PTPRA-208ENST00000455631 SP3Q02447 781 aa29.73■■■□□ 2.35
PTPRA-208ENST00000455631 GCKRQ14397 625 aa29.73■■■□□ 2.35
PTPRA-208ENST00000455631 ANKRD13AQ8IZ07 590 aa29.72■■■□□ 2.35
PTPRA-208ENST00000455631 PRMT6Q96LA8 375 aaPredicted RBP29.72■■■□□ 2.35
PTPRA-208ENST00000455631 IRS2Q9Y4H2 1338 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 BRCA2P51587 3418 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 TAF5LO75529 589 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 G2E3Q7L622 706 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 TSR2Q969E8 191 aaKnown RBP29.71■■■□□ 2.35
PTPRA-208ENST00000455631 PTPN18Q99952 460 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 AOX1Q06278 1338 aa29.71■■■□□ 2.35
PTPRA-208ENST00000455631 USP2O75604 605 aaPredicted RBP29.7■■■□□ 2.35
PTPRA-208ENST00000455631 CSF1RP07333 972 aa29.7■■■□□ 2.35
PTPRA-208ENST00000455631 RBM5P52756 815 aaKnown RBP eCLIP29.7■■■□□ 2.358e-6■■■■□ 20.7
PTPRA-208ENST00000455631 ZNF804AQ7Z570 1209 aa29.7■■■□□ 2.35
PTPRA-208ENST00000455631 HELBQ8NG08 1087 aaPredicted RBP29.7■■■□□ 2.35
PTPRA-208ENST00000455631 JAG2Q9Y219 1238 aa29.7■■■□□ 2.35
PTPRA-208ENST00000455631 ANKRD18BA2A2Z9 1011 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 CASP7P55210 303 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 CAP1Q01518 475 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 RASA3Q14644 834 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 TMEM106CQ9BVX2 250 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 MYH16Q9H6N6 1097 aa29.69■■■□□ 2.34
PTPRA-208ENST00000455631 FXR1P51114 621 aaKnown RBP eCLIP29.68■■■□□ 2.34
PTPRA-208ENST00000455631 C15orf52Q6ZUT6 534 aaKnown RBP29.68■■■□□ 2.34
PTPRA-208ENST00000455631 ELP3Q9H9T3 547 aa29.68■■■□□ 2.34
PTPRA-208ENST00000455631 TESPA1A2RU30 521 aaPredicted RBP29.67■■■□□ 2.34
PTPRA-208ENST00000455631 IL1R1P14778 569 aa29.67■■■□□ 2.34
PTPRA-208ENST00000455631 OPTNQ96CV9 577 aa29.67■■■□□ 2.34
PTPRA-208ENST00000455631 SLC4A2P04920 1241 aa29.66■■■□□ 2.34
PTPRA-208ENST00000455631 FKBP1AP62942 108 aaKnown RBP29.66■■■□□ 2.34
PTPRA-208ENST00000455631 ZNF333Q96JL9 665 aa29.66■■■□□ 2.34
PTPRA-208ENST00000455631 TWISTNBQ3B726 338 aaPredicted RBP29.65■■■□□ 2.34
PTPRA-208ENST00000455631 TNFAIP1Q13829 316 aa29.64■■■□□ 2.34
PTPRA-208ENST00000455631 SLC9C1Q4G0N8 1177 aa29.64■■■□□ 2.34
PTPRA-208ENST00000455631 CHMP3Q9Y3E7 222 aa29.64■■■□□ 2.34
PTPRA-208ENST00000455631 FLIIQ13045 1269 aa29.63■■■□□ 2.33
PTPRA-208ENST00000455631 IFIT5Q13325 482 aaKnown RBP29.63■■■□□ 2.33
PTPRA-208ENST00000455631 PTCH2Q9Y6C5 1203 aa29.63■■■□□ 2.33
PTPRA-208ENST00000455631 FKBP5Q13451 457 aaPredicted RBP29.62■■■□□ 2.33
PTPRA-208ENST00000455631 ARHGEF6Q15052 776 aa29.62■■■□□ 2.33
PTPRA-208ENST00000455631 TAF1CQ15572 869 aaPredicted RBP29.62■■■□□ 2.33
PTPRA-208ENST00000455631 NBPF11Q86T75 865 aa29.62■■■□□ 2.33
PTPRA-208ENST00000455631 LINS1Q8NG48 757 aa29.62■■■□□ 2.33
PTPRA-208ENST00000455631 DNAAF4Q8WXU2 420 aa29.62■■■□□ 2.33
PTPRA-208ENST00000455631 MS4A4AQ96JQ5 239 aa29.62■■■□□ 2.33
PTPRA-208ENST00000455631 SLC4A8Q2Y0W8 1093 aa29.61■■■□□ 2.33
PTPRA-208ENST00000455631 COLQQ9Y215 455 aaPredicted RBP29.61■■■□□ 2.33
PTPRA-208ENST00000455631 SPDYE2Q495Y8 402 aa29.6■■■□□ 2.33
PTPRA-208ENST00000455631 CNKSR2Q8WXI2 1034 aa29.6■■■□□ 2.33
PTPRA-208ENST00000455631 BRI3BPQ8WY22 251 aa29.6■■■□□ 2.33
PTPRA-208ENST00000455631 PRKRIP1Q9H875 184 aaPredicted RBP29.6■■■□□ 2.33
PTPRA-208ENST00000455631 ZFYVE28Q9HCC9 887 aa29.6■■■□□ 2.33
PTPRA-208ENST00000455631 ZNF70Q9UC06 446 aaPredicted RBP29.6■■■□□ 2.33
PTPRA-208ENST00000455631 CCL15-CCL14A0A0B4J2E2 113 aa29.59■■■□□ 2.33
PTPRA-208ENST00000455631 MYCP01106 439 aaPredicted RBP29.59■■■□□ 2.33
PTPRA-208ENST00000455631 CCL15Q16663 113 aa29.59■■■□□ 2.33
PTPRA-208ENST00000455631 ARAP2Q8WZ64 1704 aa29.59■■■□□ 2.33
PTPRA-208ENST00000455631 PLIN1O60240 522 aa29.58■■■□□ 2.33
PTPRA-208ENST00000455631 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.58■■■□□ 2.33
PTPRA-208ENST00000455631 CDAN1Q8IWY9 1227 aa29.58■■■□□ 2.33
PTPRA-208ENST00000455631 TDRD3Q9H7E2 651 aaKnown RBP29.58■■■□□ 2.33
PTPRA-208ENST00000455631 GTF2A2P52657 109 aa29.57■■■□□ 2.32
PTPRA-208ENST00000455631 FOXO4P98177 505 aa29.57■■■□□ 2.32
PTPRA-208ENST00000455631 VGLL4Q14135 290 aa29.57■■■□□ 2.32
PTPRA-208ENST00000455631 MFSD14BQ5SR56 506 aa29.57■■■□□ 2.32
PTPRA-208ENST00000455631 TTF2Q9UNY4 1162 aaKnown RBP29.57■■■□□ 2.32
PTPRA-208ENST00000455631 FAM43AQ8N2R8 423 aa29.56■■■□□ 2.32
PTPRA-208ENST00000455631 OTUD5Q96G74 571 aa29.56■■■□□ 2.32
PTPRA-208ENST00000455631 ZSWIM8A7E2V4 1837 aa29.56■■■□□ 2.32
PTPRA-208ENST00000455631 FAM205AQ6ZU69 1335 aa29.55■■■□□ 2.32
PTPRA-208ENST00000455631 TCP10L2B9ZVM9 353 aa29.55■■■□□ 2.32
PTPRA-208ENST00000455631 TAF7LQ5H9L4 462 aa29.55■■■□□ 2.32
PTPRA-208ENST00000455631 TEPSINQ96N21 525 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms