RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-206ENST00000454852 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-206ENST00000454852 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 ECE2O60344 883 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-206ENST00000454852 LMNB1P20700 586 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 ZAP70P43403 619 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 STRIP1Q5VSL9 837 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 LARGE2Q8N3Y3 721 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 ZNRF3Q9ULT6 936 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 SCN9AQ15858 1988 aa13.68□□□□□ -0.22
TRAF4-206ENST00000454852 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 SDSP20132 328 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 RASSF7Q02833 373 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
TRAF4-206ENST00000454852 KBTBD3Q8NAB2 608 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
TRAF4-206ENST00000454852 SRCAPQ6ZRS2 3230 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 CCDC88AQ3V6T2 1871 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 FZD9O00144 591 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 GOLIM4O00461 696 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
TRAF4-206ENST00000454852 AK9Q5TCS8 1911 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
TRAF4-206ENST00000454852 ZC3H4Q9UPT8 1303 aaKnown RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 USP17L3A6NCW0 530 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 USP17L4A6NCW7 530 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 G3V3G9 751 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 GPR162Q16538 588 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 LRRFIP1Q32MZ4 808 aaKnown RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 USP17L1Q7RTZ2 530 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 ANTXR1Q9H6X2 564 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
TRAF4-206ENST00000454852 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
TRAF4-206ENST00000454852 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 MYH7P12883 1935 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-206ENST00000454852 VIL1P09327 827 aaKnown RBP13.64□□□□□ -0.23
TRAF4-206ENST00000454852 MMP14P50281 582 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 GTF2IP78347 998 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-206ENST00000454852 TTLL5Q6EMB2 1281 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 EDC3Q96F86 508 aaKnown RBP13.64□□□□□ -0.23
TRAF4-206ENST00000454852 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
TRAF4-206ENST00000454852 HIP1O00291 1037 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 CXCL9Q07325 125 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 MAP3K12Q12852 859 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 UBE3CQ15386 1083 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.232e-8■■□□□ 13.1
TRAF4-206ENST00000454852 TIAM2Q8IVF5 1701 aa13.63□□□□□ -0.23
TRAF4-206ENST00000454852 MYO5AQ9Y4I1 1855 aaKnown RBP13.63□□□□□ -0.23
TRAF4-206ENST00000454852 CDC45O75419 566 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-206ENST00000454852 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-206ENST00000454852 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
TRAF4-206ENST00000454852 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 NSUN4Q96CB9 384 aaKnown RBP13.62□□□□□ -0.23
TRAF4-206ENST00000454852 GMLQ99445 158 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
TRAF4-206ENST00000454852 TCRBV5S4A2TA0A5A2 114 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
TRAF4-206ENST00000454852 RPS12P25398 132 aaKnown RBP13.61□□□□□ -0.23
TRAF4-206ENST00000454852 CHMLP26374 656 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 PRDX5P30044 214 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 ADD2P35612 726 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
TRAF4-206ENST00000454852 TNIP1Q15025 636 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 CIAPIN1Q6FI81 312 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 RSBN1LQ6PCB5 846 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-206ENST00000454852 FAM163AQ96GL9 167 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-206ENST00000454852 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 MAST3O60307 1309 aa13.61□□□□□ -0.23
TRAF4-206ENST00000454852 PSMD14O00487 310 aa13.6□□□□□ -0.23
TRAF4-206ENST00000454852 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms