RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.065e-9■■■■■ 28.9
ECHDC1-209ENST00000454591 RTEL1Q9NZ71 1219 aa14.68□□□□□ -0.06
ECHDC1-209ENST00000454591 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
ECHDC1-209ENST00000454591 FGAP02671 866 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 ARID4AP29374 1257 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 CTSWP56202 376 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 UBE3CQ15386 1083 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 ALX1Q15699 326 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 ATP2B3Q16720 1220 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 SLFNL1Q499Z3 407 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 ANO6Q4KMQ2 910 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 MTERF4Q7Z6M4 381 aaKnown RBP14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 MYRIPQ8NFW9 859 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 PDCL3Q9H2J4 239 aa14.67□□□□□ -0.06
ECHDC1-209ENST00000454591 UQCRHLA0A096LP55 91 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 YEATS4O95619 227 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 UQCRHP07919 91 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 CYP19A1P11511 503 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ADD2P35612 726 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ZAP70P43403 619 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 EVA1CP58658 441 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 FAM160A1Q05DH4 1040 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 BRAPQ7Z569 592 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 NCOA7Q8NI08 942 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 KCNF1Q9H3M0 494 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 TTC12Q9H892 705 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ASAP1Q9ULH1 1129 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 A0A0G2JLW4 131 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ANKRD18BA2A2Z9 1011 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 ZNF75DP51815 510 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 HSPA2P54652 639 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 SCARF1Q14162 830 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 IQCB1Q15051 598 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 CAMK4Q16566 473 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 TTLL5Q6EMB2 1281 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 FAM89AQ96GI7 184 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 USP28Q96RU2 1077 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
ECHDC1-209ENST00000454591 COL16A1Q07092 1604 aaPredicted RBP14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 PRC1O43663 620 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 PDE8AO60658 829 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 UQCRFS1P1P0C7P4 283 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 ZNF165P49910 485 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 ANTXR2P58335 489 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 FKBP4Q02790 459 aaKnown RBP eCLIP14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 STX1AQ16623 288 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 ADALQ6DHV7 355 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 CCDC73Q6ZRK6 1079 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 LUZP1Q86V48 1076 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 CCAR1Q8IX12 1150 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 POLR3EQ9NVU0 708 aa14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-209ENST00000454591 NID2Q14112 1375 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 AHDC1Q5TGY3 1603 aaPredicted RBP14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 CHD4Q14839 1912 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 GPAA1O43292 621 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 FGFR2P21802 821 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 ITGA6P23229 1130 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 IL6STP40189 918 aaPredicted RBP14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 MCAMP43121 646 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 CCT2P78371 535 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 ZNF34Q8IZ26 560 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 MRFAP1L1Q96HT8 127 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 RTL9Q8NET4 1388 aa14.64□□□□□ -0.07
ECHDC1-209ENST00000454591 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 ZNF213O14771 459 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 PDE8BO95263 885 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 WASHC4Q2M389 1173 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 LDHAL6AQ6ZMR3 332 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 FMR1NBQ8N0W7 255 aaPredicted RBP14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 LINC00301Q8NCQ3 95 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 KCNG4Q8TDN1 519 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 ZNF830Q96NB3 372 aaPredicted RBP14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 DOT1LQ8TEK3 1739 aa14.63□□□□□ -0.07
ECHDC1-209ENST00000454591 ZNF831Q5JPB2 1677 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 HLFQ16534 295 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 POTEHQ6S545 545 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 BPIFA3Q9BQP9 254 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 GREM2Q9H772 168 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 ANO10Q9NW15 660 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 MROH5Q6ZUA9 1318 aa14.62□□□□□ -0.07
ECHDC1-209ENST00000454591 KLF18A0A0U1RQI7 1052 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 TCRBV5S4A2TA0A5A2 114 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms