RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
LMCD1-205ENST00000454244 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-205ENST00000454244 PDE8BO95263 885 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 HSPA8P11142 646 aaKnown RBP13.48□□□□□ -0.25
LMCD1-205ENST00000454244 LBX1P52954 281 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 ZBED3Q96IU2 234 aaPredicted RBP13.48□□□□□ -0.25
LMCD1-205ENST00000454244 BEGAINQ9BUH8 593 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
LMCD1-205ENST00000454244 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 EYA2O00167 538 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
LMCD1-205ENST00000454244 NOGQ13253 232 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 ZIC5Q96T25 663 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 MEIS3Q99687 375 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 PCDHAC2Q9Y5I4 1007 aa13.47□□□□□ -0.25
LMCD1-205ENST00000454244 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
LMCD1-205ENST00000454244 A0A1B0GUL6 1792 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 BCAR3O75815 825 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 CFAP100Q494V2 611 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-205ENST00000454244 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
LMCD1-205ENST00000454244 ZNF646O15015 1829 aaPredicted RBP13.46□□□□□ -0.26
LMCD1-205ENST00000454244 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-205ENST00000454244 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
LMCD1-205ENST00000454244 FKBP1BP68106 108 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-205ENST00000454244 PUM3Q15397 648 aaKnown RBP13.45□□□□□ -0.26
LMCD1-205ENST00000454244 MOB2Q70IA6 237 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 MTMR14Q8NCE2 650 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 SIL1Q9H173 461 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
LMCD1-205ENST00000454244 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
LMCD1-205ENST00000454244 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-205ENST00000454244 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 TRIM27P14373 513 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 FGFR2P21802 821 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 NF2P35240 595 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 BCAMP50895 628 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMCD1-205ENST00000454244 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-205ENST00000454244 ATF7IPQ6VMQ6 1270 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 PRMT6Q96LA8 375 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-205ENST00000454244 TSKSQ9UJT2 592 aa13.44□□□□□ -0.26
LMCD1-205ENST00000454244 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
LMCD1-205ENST00000454244 AOX1Q06278 1338 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 MYO1BO43795 1136 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 CIAO1O76071 339 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 GNAI3P08754 354 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 SLC10A3P09131 477 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 SLC5A1P13866 664 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
LMCD1-205ENST00000454244 CLUAP1Q96AJ1 413 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
LMCD1-205ENST00000454244 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
LMCD1-205ENST00000454244 CA12O43570 354 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 PRKG1Q13976 671 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 GRIK5Q16478 980 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 LPIN2Q92539 896 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
LMCD1-205ENST00000454244 PAPPA2Q9BXP8 1791 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 CAPN15O75808 1086 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 CRKP46108 304 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
LMCD1-205ENST00000454244 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-205ENST00000454244 ARMC9Q7Z3E5 817 aa13.4□□□□□ -0.26
LMCD1-205ENST00000454244 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
LMCD1-205ENST00000454244 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
LMCD1-205ENST00000454244 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-205ENST00000454244 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
LMCD1-205ENST00000454244 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 GNAI2P04899 355 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 MTX1Q13505 466 aa13.39□□□□□ -0.27
LMCD1-205ENST00000454244 RASA3Q14644 834 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms