RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 CLN3Q13286 438 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
LINC00299-204ENST00000454043 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 STK31Q9BXU1 1019 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 GRIP2Q9C0E4 1043 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
LINC00299-204ENST00000454043 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
LINC00299-204ENST00000454043 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
LINC00299-204ENST00000454043 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 CCDC30Q5VVM6 783 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
LINC00299-204ENST00000454043 EXOC6Q8TAG9 804 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 POM121Q96HA1 1249 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 CRBNQ96SW2 442 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 API5Q9BZZ5 524 aaKnown RBP9.7□□□□□ -0.86
LINC00299-204ENST00000454043 LGR6Q9HBX8 967 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
LINC00299-204ENST00000454043 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 LMO7Q8WWI1 1683 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 COL14A1Q05707 1796 aaKnown RBP9.7□□□□□ -0.86
LINC00299-204ENST00000454043 DLG5Q8TDM6 1919 aa9.7□□□□□ -0.86
LINC00299-204ENST00000454043 MYCP01106 439 aaPredicted RBP9.69□□□□□ -0.86
LINC00299-204ENST00000454043 ITGA6P23229 1130 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 BCL2L13Q9BXK5 485 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 ARHGEF10LQ9HCE6 1279 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 MIS18AQ9NYP9 233 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
LINC00299-204ENST00000454043 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
LINC00299-204ENST00000454043 PTPRCP08575 1304 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 ERVV-2B6SEH9 535 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 EXOC5O00471 708 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 RHOQP17081 205 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 CABP4P57796 275 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 ALG2Q9H553 416 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 DDX19BQ9UMR2 479 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 DOLKQ9UPQ8 538 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
LINC00299-204ENST00000454043 MAP7D1Q3KQU3 841 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 C20orf194Q5TEA3 1177 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 VWA5B2Q8N398 1253 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 HRH3Q9Y5N1 445 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
LINC00299-204ENST00000454043 MEGF6O75095 1541 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 CYP27B1O15528 508 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 RAD21O60216 631 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 IL2RAP01589 272 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 TRIM27P14373 513 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
LINC00299-204ENST00000454043 CENPCQ03188 943 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 POU4F2Q12837 409 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
LINC00299-204ENST00000454043 B4GALNT3Q6L9W6 998 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 ZSCAN1Q8NBB4 408 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
LINC00299-204ENST00000454043 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
LINC00299-204ENST00000454043 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 SPATA31C2B4DYI2 1134 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 WDR44Q5JSH3 913 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 SLC27A3Q5K4L6 730 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
LINC00299-204ENST00000454043 ZNF790Q6PG37 636 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 UNC5CLQ8IV45 518 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
LINC00299-204ENST00000454043 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
LINC00299-204ENST00000454043 LRRC37A3O60309 1634 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 SPATA31A1Q5TZJ5 1347 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 KRT76Q01546 638 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 ITPRIPQ8IWB1 547 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 PLPP7Q8NBV4 271 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 FMNL2Q96PY5 1086 aa9.64□□□□□ -0.87
LINC00299-204ENST00000454043 PARP4Q9UKK3 1724 aaKnown RBP9.64□□□□□ -0.87
LINC00299-204ENST00000454043 SPATA31A5Q5VU36 1347 aa9.63□□□□□ -0.87
LINC00299-204ENST00000454043 SPATA31A7Q8IWB4 1347 aa9.63□□□□□ -0.87
LINC00299-204ENST00000454043 SNRPA1P09661 255 aaKnown RBP9.63□□□□□ -0.87
LINC00299-204ENST00000454043 DDB1Q16531 1140 aa9.63□□□□□ -0.87
LINC00299-204ENST00000454043 KRT24Q2M2I5 525 aa9.63□□□□□ -0.87
LINC00299-204ENST00000454043 CENPQQ7L2Z9 268 aaPredicted RBP9.63□□□□□ -0.87
LINC00299-204ENST00000454043 FNBP4Q8N3X1 1017 aaPredicted RBP9.63□□□□□ -0.87
LINC00299-204ENST00000454043 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
LINC00299-204ENST00000454043 RWDD1Q9H446 243 aaPredicted RBP9.63□□□□□ -0.87
LINC00299-204ENST00000454043 CUEDC1Q9NWM3 386 aaPredicted RBP9.63□□□□□ -0.87
LINC00299-204ENST00000454043 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms