RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
HSPG2-207ENST00000453796 WNT10BO00744 389 aa18.2■□□□□ 0.5
HSPG2-207ENST00000453796 MTX1Q13505 466 aa18.2■□□□□ 0.5
HSPG2-207ENST00000453796 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
HSPG2-207ENST00000453796 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
HSPG2-207ENST00000453796 SAPCD2Q86UD0 394 aa18.2■□□□□ 0.5
HSPG2-207ENST00000453796 TMEM57Q8N5G2 664 aa18.2■□□□□ 0.5
HSPG2-207ENST00000453796 CIAO1O76071 339 aa18.19■□□□□ 0.5
HSPG2-207ENST00000453796 COPRSQ9NQ92 184 aa18.19■□□□□ 0.5
HSPG2-207ENST00000453796 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
HSPG2-207ENST00000453796 SULF1Q8IWU6 871 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 MTMR14Q8NCE2 650 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 ZNF408Q9H9D4 720 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
HSPG2-207ENST00000453796 JAG2Q9Y219 1238 aa18.18■□□□□ 0.5
HSPG2-207ENST00000453796 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
HSPG2-207ENST00000453796 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
HSPG2-207ENST00000453796 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
HSPG2-207ENST00000453796 SIL1Q9H173 461 aa18.17■□□□□ 0.5
HSPG2-207ENST00000453796 RLBP1P12271 317 aa18.16■□□□□ 0.5
HSPG2-207ENST00000453796 CYP4F22Q6NT55 531 aa18.16■□□□□ 0.5
HSPG2-207ENST00000453796 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
HSPG2-207ENST00000453796 PAPPA2Q9BXP8 1791 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 GNAI2P04899 355 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 IFIT1P09914 478 aaKnown RBP18.15■□□□□ 0.5
HSPG2-207ENST00000453796 IL15P40933 162 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-207ENST00000453796 BCAMP50895 628 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 CAVIN4Q5BKX8 364 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 MFSD14BQ5SR56 506 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 LPIN2Q92539 896 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 CAPNS2Q96L46 248 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
HSPG2-207ENST00000453796 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-207ENST00000453796 PCDHAC2Q9Y5I4 1007 aa18.15■□□□□ 0.5
HSPG2-207ENST00000453796 F8W031 263 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-207ENST00000453796 SRGAP3O43295 1099 aa18.14■□□□□ 0.49
HSPG2-207ENST00000453796 SLC5A1P13866 664 aa18.14■□□□□ 0.49
HSPG2-207ENST00000453796 DZIP1LQ8IYY4 767 aaKnown RBP18.14■□□□□ 0.49
HSPG2-207ENST00000453796 GBA2Q9HCG7 927 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-207ENST00000453796 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
HSPG2-207ENST00000453796 ECE1P42892 770 aa18.13■□□□□ 0.49
HSPG2-207ENST00000453796 DLGAP5Q15398 846 aa18.13■□□□□ 0.49
HSPG2-207ENST00000453796 CFAP100Q494V2 611 aa18.13■□□□□ 0.49
HSPG2-207ENST00000453796 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
HSPG2-207ENST00000453796 COL1A1P02452 1464 aaPredicted RBP18.13■□□□□ 0.49
HSPG2-207ENST00000453796 PNMA6EA0A0J9YXQ4 647 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 HUNKP57058 714 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 GRIK5Q16478 980 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 ATP2B3Q16720 1220 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 FTSJ3Q8IY81 847 aaKnown RBP18.12■□□□□ 0.49
HSPG2-207ENST00000453796 C2orf69Q8N8R5 385 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 WBP1LQ9NX94 342 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 AOX1Q06278 1338 aa18.12■□□□□ 0.49
HSPG2-207ENST00000453796 ZBTB7BO15156 539 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-207ENST00000453796 PAXIP1Q6ZW49 1069 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-207ENST00000453796 APOBEC3FQ8IUX4 373 aaKnown RBP18.11■□□□□ 0.49
HSPG2-207ENST00000453796 PRMT6Q96LA8 375 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-207ENST00000453796 ZBTB22O15209 634 aa18.1■□□□□ 0.49
HSPG2-207ENST00000453796 CHAF1AQ13111 956 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-207ENST00000453796 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
HSPG2-207ENST00000453796 TBC1D22AQ8WUA7 517 aa18.1■□□□□ 0.49
HSPG2-207ENST00000453796 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
HSPG2-207ENST00000453796 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
HSPG2-207ENST00000453796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-207ENST00000453796 FOXN1O15353 648 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 AOC2O75106 756 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-207ENST00000453796 MAP2K2P36507 400 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 FKBP1BP68106 108 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 POLA2Q14181 598 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
HSPG2-207ENST00000453796 FAM155AB1AL88 458 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-207ENST00000453796 ATP8B2P98198 1209 aa18.08■□□□□ 0.48
HSPG2-207ENST00000453796 TFCP2Q12800 502 aa18.08■□□□□ 0.48
HSPG2-207ENST00000453796 GRM1Q13255 1194 aa18.08■□□□□ 0.48
HSPG2-207ENST00000453796 RGMBQ6NW40 437 aa18.08■□□□□ 0.48
HSPG2-207ENST00000453796 SSH3Q8TE77 659 aa18.08■□□□□ 0.48
HSPG2-207ENST00000453796 ADORA1P30542 326 aa18.07■□□□□ 0.48
HSPG2-207ENST00000453796 PHKA1P46020 1223 aa18.07■□□□□ 0.48
HSPG2-207ENST00000453796 CRKP46108 304 aa18.07■□□□□ 0.48
HSPG2-207ENST00000453796 HDLBPQ00341 1268 aaKnown RBP18.07■□□□□ 0.48
HSPG2-207ENST00000453796 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-207ENST00000453796 PANK1Q8TE04 598 aa18.07■□□□□ 0.48
HSPG2-207ENST00000453796 SUGT1Q9Y2Z0 365 aa18.07■□□□□ 0.48
HSPG2-207ENST00000453796 SSC5DA1L4H1 1573 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 A0A1B0GUL7 405 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 CLRN2A0PK11 232 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 MYO1BO43795 1136 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 RBM5P52756 815 aaKnown RBP eCLIP18.06■□□□□ 0.48
HSPG2-207ENST00000453796 TIMM10P62072 90 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 MOB2Q70IA6 237 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 WDR66Q8TBY9 1149 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 ZIC5Q96T25 663 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 MRIQ9BWK5 157 aa18.06■□□□□ 0.48
HSPG2-207ENST00000453796 DEFB129Q9H1M3 183 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms