RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SNRKQ9NRH2 765 aa19.02■□□□□ 0.64
SNX17-204ENST00000453453 CD2APQ9Y5K6 639 aa19.02■□□□□ 0.64
SNX17-204ENST00000453453 C6orf229H3BNL8 230 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 SEMA3EO15041 775 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 DPEP1P16444 411 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
SNX17-204ENST00000453453 C15orf52Q6ZUT6 534 aaKnown RBP19.01■□□□□ 0.63
SNX17-204ENST00000453453 FBXO33Q7Z6M2 555 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 KBTBD3Q8NAB2 608 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 SPATA5Q8NB90 893 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 FAM84BQ96KN1 310 aaPredicted RBP19.01■□□□□ 0.63
SNX17-204ENST00000453453 PPP1R1BQ9UD71 204 aaPredicted RBP19.01■□□□□ 0.63
SNX17-204ENST00000453453 NDUFB9Q9Y6M9 179 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 MYH7P12883 1935 aa19.01■□□□□ 0.63
SNX17-204ENST00000453453 A0A0G2JLW4 131 aa19■□□□□ 0.63
SNX17-204ENST00000453453 SCARF1Q14162 830 aa19■□□□□ 0.63
SNX17-204ENST00000453453 GRIPAP1Q4V328 841 aa19■□□□□ 0.63
SNX17-204ENST00000453453 KLHL34Q8N239 644 aa19■□□□□ 0.63
SNX17-204ENST00000453453 TBC1D16Q8TBP0 767 aa19■□□□□ 0.63
SNX17-204ENST00000453453 EDC3Q96F86 508 aaKnown RBP19■□□□□ 0.63
SNX17-204ENST00000453453 DENND2AQ9ULE3 1009 aa19■□□□□ 0.63
SNX17-204ENST00000453453 MED23Q9ULK4 1368 aa19■□□□□ 0.63
SNX17-204ENST00000453453 WTIPA6NIX2 430 aaPredicted RBP19■□□□□ 0.63
SNX17-204ENST00000453453 PTGER2P43116 358 aa19■□□□□ 0.63
SNX17-204ENST00000453453 ZAP70P43403 619 aa19■□□□□ 0.63
SNX17-204ENST00000453453 TRIM44Q96DX7 344 aaPredicted RBP19■□□□□ 0.63
SNX17-204ENST00000453453 HMG20BQ9P0W2 317 aa19■□□□□ 0.63
SNX17-204ENST00000453453 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
SNX17-204ENST00000453453 RASGRF1Q13972 1273 aa18.99■□□□□ 0.63
SNX17-204ENST00000453453 TNPO1Q92973 898 aaKnown RBP18.99■□□□□ 0.63
SNX17-204ENST00000453453 EYA3Q99504 573 aa18.99■□□□□ 0.63
SNX17-204ENST00000453453 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.99■□□□□ 0.638e-8■■■■□ 25
SNX17-204ENST00000453453 GZF1Q9H116 711 aaPredicted RBP18.99■□□□□ 0.63
SNX17-204ENST00000453453 PIM2Q9P1W9 311 aa18.99■□□□□ 0.63
SNX17-204ENST00000453453 GOLGA6L22H0YM25 854 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 REC8O95072 547 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 KLRK1P26718 216 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 SLC51AQ86UW1 340 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 PPP1R9BQ96SB3 815 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
SNX17-204ENST00000453453 POLLQ9UGP5 575 aa18.98■□□□□ 0.63
SNX17-204ENST00000453453 PDS5AQ29RF7 1337 aaKnown RBP18.97■□□□□ 0.63
SNX17-204ENST00000453453 IRS2Q9Y4H2 1338 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 TERF1P54274 439 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 PI16Q6UXB8 463 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 DOCK2Q92608 1830 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 DUOX1Q9NRD9 1551 aa18.97■□□□□ 0.63
SNX17-204ENST00000453453 ZBTB22O15209 634 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 ZFYP08048 801 aaPredicted RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 HSP90AA2PQ14568 343 aaPredicted RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 ZC3H12CQ9C0D7 883 aaKnown RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 IQSEC3Q9UPP2 1182 aaPredicted RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 BRCA1P38398 1863 aaKnown RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 RAD50Q92878 1312 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 CYP2E1P05181 493 aaPredicted RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 KCNA3P22001 575 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 CCDC93Q567U6 631 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
SNX17-204ENST00000453453 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
SNX17-204ENST00000453453 K7ELQ4 463 aaPredicted RBP18.95■□□□□ 0.62
SNX17-204ENST00000453453 RNF113AO15541 343 aaKnown RBP18.95■□□□□ 0.62
SNX17-204ENST00000453453 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
SNX17-204ENST00000453453 DALRD3Q5D0E6 543 aaKnown RBP18.95■□□□□ 0.62
SNX17-204ENST00000453453 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
SNX17-204ENST00000453453 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
SNX17-204ENST00000453453 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
SNX17-204ENST00000453453 GPR101Q96P66 508 aaPredicted RBP18.95■□□□□ 0.62
SNX17-204ENST00000453453 G3V3G9 751 aa18.94■□□□□ 0.62
SNX17-204ENST00000453453 C21orf2O43822 256 aa18.94■□□□□ 0.62
SNX17-204ENST00000453453 MAP3K12Q12852 859 aa18.94■□□□□ 0.62
SNX17-204ENST00000453453 HS1BP3Q53T59 392 aa18.94■□□□□ 0.62
SNX17-204ENST00000453453 DCAF8Q5TAQ9 597 aa18.94■□□□□ 0.62
SNX17-204ENST00000453453 MYO5AQ9Y4I1 1855 aaKnown RBP18.94■□□□□ 0.62
SNX17-204ENST00000453453 SGSM2O43147 1006 aa18.93■□□□□ 0.62
SNX17-204ENST00000453453 IDH1O75874 414 aaKnown RBP18.93■□□□□ 0.62
SNX17-204ENST00000453453 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
SNX17-204ENST00000453453 PIH1D3Q9NQM4 214 aaKnown RBP18.93■□□□□ 0.62
SNX17-204ENST00000453453 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
SNX17-204ENST00000453453 KLHL40Q2TBA0 621 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
SNX17-204ENST00000453453 TDRD7Q8NHU6 1098 aaKnown RBP18.92■□□□□ 0.62
SNX17-204ENST00000453453 RTFDC1Q9BY42 306 aaPredicted RBP18.92■□□□□ 0.62
SNX17-204ENST00000453453 COA1Q9GZY4 146 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 LRP2BPQ9P2M1 347 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 IL1R1P14778 569 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 FAM227BQ96M60 508 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 CD209Q9NNX6 404 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
SNX17-204ENST00000453453 COL1A1P02452 1464 aaPredicted RBP18.92■□□□□ 0.62
SNX17-204ENST00000453453 CCDC88AQ3V6T2 1871 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms