RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 DPP8Q6V1X1 898 aaPredicted RBP10.83□□□□□ -0.68
COL28A1-205ENST00000453441 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 MPNDQ8N594 471 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 KCNK17Q96T54 332 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 RTFDC1Q9BY42 306 aaPredicted RBP10.83□□□□□ -0.68
COL28A1-205ENST00000453441 CHD4Q14839 1912 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 TAF1P21675 1872 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 XDHP47989 1333 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 MROH5Q6ZUA9 1318 aa10.83□□□□□ -0.68
COL28A1-205ENST00000453441 SRGAP3O43295 1099 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 CIAO1O76071 339 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 LMNB1P20700 586 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 ATP2B4P23634 1241 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 EYA3Q99504 573 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 COPRSQ9NQ92 184 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 CNNM1Q9NRU3 951 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 LEMD3Q9Y2U8 911 aa10.82□□□□□ -0.68
COL28A1-205ENST00000453441 SUPT16HQ9Y5B9 1047 aaKnown RBP10.82□□□□□ -0.68
COL28A1-205ENST00000453441 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 EYA2O00167 538 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 IL15P40933 162 aaPredicted RBP10.81□□□□□ -0.68
COL28A1-205ENST00000453441 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
COL28A1-205ENST00000453441 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 ANKIB1Q9P2G1 1089 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 WWC3Q9ULE0 1092 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
COL28A1-205ENST00000453441 NSFL1CQ9UNZ2 370 aaKnown RBP10.81□□□□□ -0.68
COL28A1-205ENST00000453441 DICER1Q9UPY3 1922 aaKnown RBP10.8□□□□□ -0.68
COL28A1-205ENST00000453441 NFKBIEO00221 500 aa10.8□□□□□ -0.68
COL28A1-205ENST00000453441 PTPN12Q05209 780 aaKnown RBP10.8□□□□□ -0.68
COL28A1-205ENST00000453441 HSP90AB4PQ58FF6 505 aa10.8□□□□□ -0.68
COL28A1-205ENST00000453441 DMRTA1Q5VZB9 504 aa10.8□□□□□ -0.68
COL28A1-205ENST00000453441 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
COL28A1-205ENST00000453441 SBF1O95248 1867 aa10.8□□□□□ -0.68
COL28A1-205ENST00000453441 GOLGB1Q14789 3259 aaKnown RBP10.8□□□□□ -0.68
COL28A1-205ENST00000453441 IARSP41252 1262 aaKnown RBP10.79□□□□□ -0.68
COL28A1-205ENST00000453441 GPSM2P81274 684 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 CHRNDQ07001 517 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 NBR1Q14596 966 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 TBC1D16Q8TBP0 767 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
COL28A1-205ENST00000453441 RIPOR2Q9Y4F9 1068 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 A0A1B0GUL6 1792 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 COL4A1P02462 1669 aa10.79□□□□□ -0.68
COL28A1-205ENST00000453441 MED23Q9ULK4 1368 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 DUOX1Q9NRD9 1551 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 PNMA6EA0A0J9YXQ4 647 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 C6orf229H3BNL8 230 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 UFL1O94874 794 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 KCNJ4P48050 445 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 KIAA2012Q0VF49 1180 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 MMRN1Q13201 1228 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL28A1-205ENST00000453441 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 METTL24Q5JXM2 366 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 C15orf52Q6ZUT6 534 aaKnown RBP10.78□□□□□ -0.68
COL28A1-205ENST00000453441 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 JDP2Q8WYK2 163 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 CRBNQ96SW2 442 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 ZC3H12CQ9C0D7 883 aaKnown RBP10.78□□□□□ -0.68
COL28A1-205ENST00000453441 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 NOP58Q9Y2X3 529 aaKnown RBP10.78□□□□□ -0.68
COL28A1-205ENST00000453441 ZNF804BA4D1E1 1349 aa10.78□□□□□ -0.68
COL28A1-205ENST00000453441 CCDC88AQ3V6T2 1871 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 PPIP5K2O43314 1243 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 PDE8BO95263 885 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 RASSF7Q02833 373 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.69
COL28A1-205ENST00000453441 WASHC4Q2M389 1173 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 RNF181Q9P0P0 153 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 AKAP2Q9Y2D5 859 aa10.77□□□□□ -0.69
COL28A1-205ENST00000453441 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
COL28A1-205ENST00000453441 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
COL28A1-205ENST00000453441 C9orf131Q5VYM1 1079 aa10.76□□□□□ -0.69
COL28A1-205ENST00000453441 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
COL28A1-205ENST00000453441 NIM1KQ8IY84 436 aa10.76□□□□□ -0.69
COL28A1-205ENST00000453441 PUS3Q9BZE2 481 aaKnown RBP10.76□□□□□ -0.69
COL28A1-205ENST00000453441 ZNF277Q9NRM2 450 aaPredicted RBP10.76□□□□□ -0.69
COL28A1-205ENST00000453441 POLLQ9UGP5 575 aa10.76□□□□□ -0.69
COL28A1-205ENST00000453441 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 IFIT1P09914 478 aaKnown RBP10.75□□□□□ -0.69
COL28A1-205ENST00000453441 SLC5A1P13866 664 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
COL28A1-205ENST00000453441 LRRC24Q50LG9 513 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 PODNQ7Z5L7 613 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 VGLL2Q8N8G2 317 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 KLHDC4Q8TBB5 520 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms