RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 THSD7BQ9C0I4 1608 aa24.78■■□□□ 1.56
COL9A3-202ENST00000452372 USP17L3A6NCW0 530 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 USP17L4A6NCW7 530 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 HSPA8P11142 646 aaKnown RBP24.77■■□□□ 1.56
COL9A3-202ENST00000452372 ECE1P42892 770 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 POLA2Q14181 598 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 USP17L1Q7RTZ2 530 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 SSH3Q8TE77 659 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 ZBTB40Q9NUA8 1239 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 CEP126Q9P2H0 1117 aa24.77■■□□□ 1.56
COL9A3-202ENST00000452372 AOC2O75106 756 aa24.76■■□□□ 1.55
COL9A3-202ENST00000452372 CAPN15O75808 1086 aa24.76■■□□□ 1.55
COL9A3-202ENST00000452372 FGFR2P21802 821 aa24.76■■□□□ 1.55
COL9A3-202ENST00000452372 ZNF804AQ7Z570 1209 aa24.76■■□□□ 1.55
COL9A3-202ENST00000452372 HHIPL1Q96JK4 782 aa24.76■■□□□ 1.55
COL9A3-202ENST00000452372 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 ZNF280AP59817 542 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 PUM3Q15397 648 aaKnown RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 RSBN1LQ6PCB5 846 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 PAXIP1Q6ZW49 1069 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 FAM84BQ96KN1 310 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 ZNF408Q9H9D4 720 aa24.75■■□□□ 1.55
COL9A3-202ENST00000452372 ASTN2O75129 1339 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-202ENST00000452372 IL1R1P14778 569 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 MAP2K2P36507 400 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 GRM1Q13255 1194 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 STRIP1Q5VSL9 837 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 CEP85Q6P2H3 762 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 AGBL3Q8NEM8 1001 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 ZNF609O15014 1411 aa24.74■■□□□ 1.55
COL9A3-202ENST00000452372 HIBADHP31937 336 aaKnown RBP24.73■■□□□ 1.55
COL9A3-202ENST00000452372 KRT26Q7Z3Y9 468 aa24.73■■□□□ 1.55
COL9A3-202ENST00000452372 LPIN2Q92539 896 aa24.73■■□□□ 1.55
COL9A3-202ENST00000452372 IFIT1P09914 478 aaKnown RBP24.72■■□□□ 1.55
COL9A3-202ENST00000452372 GYG1P46976 350 aa24.72■■□□□ 1.55
COL9A3-202ENST00000452372 G3BP1Q13283 466 aaKnown RBP eCLIP24.72■■□□□ 1.55
COL9A3-202ENST00000452372 KIF4BQ2VIQ3 1234 aa24.72■■□□□ 1.55
COL9A3-202ENST00000452372 DACT2Q5SW24 774 aa24.72■■□□□ 1.55
COL9A3-202ENST00000452372 TTLL5Q6EMB2 1281 aa24.72■■□□□ 1.55
COL9A3-202ENST00000452372 FBXO33Q7Z6M2 555 aa24.72■■□□□ 1.55
COL9A3-202ENST00000452372 ADM5C9JUS6 153 aa24.71■■□□□ 1.55
COL9A3-202ENST00000452372 ZNF646O15015 1829 aaPredicted RBP24.7■■□□□ 1.55
COL9A3-202ENST00000452372 SLC5A1P13866 664 aa24.7■■□□□ 1.54
COL9A3-202ENST00000452372 GTF2IP78347 998 aa24.7■■□□□ 1.54
COL9A3-202ENST00000452372 ATP2B3Q16720 1220 aa24.7■■□□□ 1.54
COL9A3-202ENST00000452372 CAVIN4Q5BKX8 364 aa24.7■■□□□ 1.54
COL9A3-202ENST00000452372 RPAP2Q8IXW5 612 aaPredicted RBP24.7■■□□□ 1.54
COL9A3-202ENST00000452372 TDRD7Q8NHU6 1098 aaKnown RBP24.7■■□□□ 1.54
COL9A3-202ENST00000452372 DCPSQ96C86 337 aaKnown RBP24.7■■□□□ 1.54
COL9A3-202ENST00000452372 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
COL9A3-202ENST00000452372 SASH1O94885 1247 aa24.69■■□□□ 1.54
COL9A3-202ENST00000452372 VPS37DQ86XT2 251 aa24.69■■□□□ 1.54
COL9A3-202ENST00000452372 FBXW7Q969H0 707 aa24.69■■□□□ 1.54
COL9A3-202ENST00000452372 NOP58Q9Y2X3 529 aaKnown RBP24.69■■□□□ 1.54
COL9A3-202ENST00000452372 MYO3BQ8WXR4 1341 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 SURF6O75683 361 aaKnown RBP24.68■■□□□ 1.54
COL9A3-202ENST00000452372 USP17L8P0C7I0 530 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 TFCP2Q12800 502 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 SCARF1Q14162 830 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 MXD3Q9BW11 206 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 GGA3Q9NZ52 723 aa24.68■■□□□ 1.54
COL9A3-202ENST00000452372 BCAMP50895 628 aa24.67■■□□□ 1.54
COL9A3-202ENST00000452372 HUNKP57058 714 aa24.67■■□□□ 1.54
COL9A3-202ENST00000452372 AKAP2Q9Y2D5 859 aa24.67■■□□□ 1.54
COL9A3-202ENST00000452372 FAM205AQ6ZU69 1335 aa24.66■■□□□ 1.54
COL9A3-202ENST00000452372 GBA2Q9HCG7 927 aaPredicted RBP24.66■■□□□ 1.54
COL9A3-202ENST00000452372 MYOZ2Q9NPC6 264 aa24.66■■□□□ 1.54
COL9A3-202ENST00000452372 FAM155AB1AL88 458 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-202ENST00000452372 ANGEL2Q5VTE6 544 aaKnown RBP24.65■■□□□ 1.54
COL9A3-202ENST00000452372 TIMM10P62072 90 aa24.64■■□□□ 1.54
COL9A3-202ENST00000452372 FKBP1AP62942 108 aaKnown RBP24.64■■□□□ 1.54
COL9A3-202ENST00000452372 OS9Q13438 667 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-202ENST00000452372 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
COL9A3-202ENST00000452372 TSKSQ9UJT2 592 aa24.64■■□□□ 1.54
COL9A3-202ENST00000452372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-202ENST00000452372 HMMRO75330 724 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 MMP14P50281 582 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 SULF1Q8IWU6 871 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 CERS5Q8N5B7 392 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 C2orf69Q8N8R5 385 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 CDCA5Q96FF9 252 aa24.63■■□□□ 1.53
COL9A3-202ENST00000452372 A0A1B0GUL7 405 aa24.62■■□□□ 1.53
COL9A3-202ENST00000452372 RGMBQ6NW40 437 aa24.62■■□□□ 1.53
COL9A3-202ENST00000452372 BEGAINQ9BUH8 593 aa24.62■■□□□ 1.53
COL9A3-202ENST00000452372 GPR108Q9NPR9 543 aa24.62■■□□□ 1.53
COL9A3-202ENST00000452372 IQSEC3Q9UPP2 1182 aaPredicted RBP24.62■■□□□ 1.53
COL9A3-202ENST00000452372 JAG2Q9Y219 1238 aa24.62■■□□□ 1.53
COL9A3-202ENST00000452372 FRAT2O75474 233 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-202ENST00000452372 NOGQ13253 232 aa24.61■■□□□ 1.53
COL9A3-202ENST00000452372 NBPF9Q3BBW0 867 aa24.61■■□□□ 1.53
COL9A3-202ENST00000452372 OGFOD1Q8N543 542 aa24.61■■□□□ 1.53
COL9A3-202ENST00000452372 SCAF8Q9UPN6 1271 aaKnown RBP24.61■■□□□ 1.53
COL9A3-202ENST00000452372 CASP8AP2Q9UKL3 1982 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 ADORA1P30542 326 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 KIAA0825Q8IV33 1275 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 XAGE2Q96GT9 111 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 GNL3LQ9NVN8 582 aaKnown RBP24.6■■□□□ 1.53
COL9A3-202ENST00000452372 ARAP2Q8WZ64 1704 aa24.6■■□□□ 1.53
COL9A3-202ENST00000452372 PITPNM2Q9BZ72 1349 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms